RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 SASH3O75995 380 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 MOCS3O95396 460 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 MAPTP10636 758 aaKnown RBP9.91□□□□□ -0.82
TDP1-202ENST00000393452 PTPRAP18433 802 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 PLA2G4AP47712 749 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 QARSP47897 775 aaKnown RBP9.91□□□□□ -0.82
TDP1-202ENST00000393452 RARRES1P49788 294 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 RASSF7Q02833 373 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 CKAP4Q07065 602 aaKnown RBP9.91□□□□□ -0.82
TDP1-202ENST00000393452 KLHL30Q0D2K2 578 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 MYBPC2Q14324 1141 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 R3HDM1Q15032 1099 aaKnown RBP9.91□□□□□ -0.82
TDP1-202ENST00000393452 DCAF17Q5H9S7 520 aaPredicted RBP9.91□□□□□ -0.82
TDP1-202ENST00000393452 HS2ST1Q7LGA3 356 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 ZNF572Q7Z3I7 529 aaPredicted RBP9.91□□□□□ -0.82
TDP1-202ENST00000393452 GPIHBP1Q8IV16 184 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 FAM133AQ8N9E0 248 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 ZNF280CQ8ND82 737 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 REPS2Q8NFH8 660 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 GOLGA5Q8TBA6 731 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 TRERF1Q96PN7 1200 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 PDCD2LQ9BRP1 358 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 FUT8Q9BYC5 575 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 UBXN6Q9BZV1 441 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 LUC7LQ9NQ29 371 aaKnown RBP9.91□□□□□ -0.82
TDP1-202ENST00000393452 PXMP2Q9NR77 195 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 ADAMTS5Q9UNA0 930 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 BZW2Q9Y6E2 419 aaKnown RBP9.91□□□□□ -0.82
TDP1-202ENST00000393452 KIAA1217Q5T5P2 1943 aa9.91□□□□□ -0.82
TDP1-202ENST00000393452 A0A087X0T9 212 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 PPP1R12BO60237 982 aaPredicted RBP9.9□□□□□ -0.82
TDP1-202ENST00000393452 FAM228BP0C875 321 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 PRKCIP41743 596 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 JAM2P57087 298 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 ITIH3Q06033 890 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 COG2Q14746 738 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 ASIC2Q16515 512 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 LONRF2Q1L5Z9 754 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 BEND6Q5SZJ8 279 aaPredicted RBP9.9□□□□□ -0.82
TDP1-202ENST00000393452 TCERG1LQ5VWI1 586 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 WDR93Q6P2C0 686 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 XRRA1Q6P2D8 792 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 RNF207Q6ZRF8 634 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 FAM186BQ8IYM0 893 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 ATG4CQ96DT6 458 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 ALS2CR12Q96Q35 445 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 RMDN3Q96TC7 470 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 AS3MTQ9HBK9 375 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 PKD2L1Q9P0L9 805 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 LARSQ9P2J5 1176 aaKnown RBP9.9□□□□□ -0.82
TDP1-202ENST00000393452 GJA3Q9Y6H8 435 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 UTRNP46939 3433 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 PDE2AO00408 941 aaPredicted RBP9.9□□□□□ -0.82
TDP1-202ENST00000393452 MAP2K7O14733 419 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 EIF2AK2P19525 551 aaKnown RBP9.9□□□□□ -0.82
TDP1-202ENST00000393452 ANXA13P27216 316 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 OAZ1P54368 228 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 PTK2Q05397 1052 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 ALCAMQ13740 583 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 NAB2Q15742 525 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 CREG2Q8IUH2 290 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 APOBEC3FQ8IUX4 373 aaKnown RBP9.9□□□□□ -0.82
TDP1-202ENST00000393452 KSR1Q8IVT5 923 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 C4orf19Q8IY42 314 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 RBM46Q8TBY0 533 aaKnown RBP9.9□□□□□ -0.82
TDP1-202ENST00000393452 WNK4Q96J92 1243 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 NOX5Q96PH1 765 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 SPAG5Q96R06 1193 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 GCNT4Q9P109 453 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 ADAMTS1Q9UHI8 967 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 RIPK3Q9Y572 518 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 ATP8B3O60423 1300 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 ZNF541Q9H0D2 1346 aa9.9□□□□□ -0.82
TDP1-202ENST00000393452 ZNF185O15231 689 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 RHOXF2BP0C7M4 288 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 TCP1P17987 556 aaKnown RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 FMO5P49326 533 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 JAK3P52333 1124 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 VSNL1P62760 191 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 GABPB1Q06547 395 aaPredicted RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 PPP2R5AQ15172 486 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 C10orf76Q5T2E6 689 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 MSL3Q8N5Y2 521 aaKnown RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 ZKSCAN4Q969J2 545 aaPredicted RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 WRNIP1Q96S55 665 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 RHOXF2Q9BQY4 288 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 TIPINQ9BVW5 301 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 TLR10Q9BXR5 811 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 ST6GALNAC4Q9H4F1 302 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 PPP1R1BQ9UD71 204 aaPredicted RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 NENFQ9UMX5 172 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 FRMD4BQ9Y2L6 1034 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 CTDP1Q9Y5B0 961 aaPredicted RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 TARSL2A2RTX5 802 aaKnown RBP9.89□□□□□ -0.83
TDP1-202ENST00000393452 BTNL10A8MVZ5 291 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 C19orf81C9J6K1 198 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 ATP2A1O14983 1001 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 ATP9AO75110 1047 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 ERLIN1O75477 346 aa9.89□□□□□ -0.83
TDP1-202ENST00000393452 CCNE2O96020 404 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms