RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 PCDH8O95206 1070 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MSL3P1P0C860 447 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MTHFD2P13995 350 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 COL8A1P27658 744 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 PEX2P28328 305 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 FNTBP49356 437 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 CLCN7P51798 805 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 SLC5A3P53794 718 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 SLC16A1P53985 500 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 BCAR1P56945 870 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 FAM193AP78312 1265 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MRPS9P82933 396 aaKnown RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 SLC6A3Q01959 620 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 CYP27A1Q02318 531 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 PPARAQ07869 468 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 FOXD4Q12950 439 aaPredicted RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 DUSP4Q13115 394 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 IFIT5Q13325 482 aaKnown RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 BIRC3Q13489 604 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 SEMA5AQ13591 1074 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MOGSQ13724 837 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 TRIM25Q14258 630 aaKnown RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 KIR3DS1Q14943 382 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 CNN3Q15417 329 aaKnown RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MUM1Q2TAK8 710 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 SLC4A8Q2Y0W8 1093 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 C3orf36Q3SXR2 165 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 TUBB8Q3ZCM7 444 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 CCDC157Q569K6 752 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MROH9Q5TGP6 573 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 RNF220Q5VTB9 566 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 PRAMEF18Q5VWM3 479 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MBNL2Q5VZF2 373 aaKnown RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 TIGD7Q6NT04 549 aaPredicted RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 CCDC174Q6PII3 467 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 LMBR1LQ6UX01 489 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 NPNTQ6UXI9 565 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 UNQ6494/PRO21346Q6UXR6 183 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 CEP128Q6ZU80 1094 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 TMPRSS7Q7RTY8 843 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 SLCO6A1Q86UG4 719 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MYLK4Q86YV6 388 aaPredicted RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 PHYKPLQ8IUZ5 450 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 KIAA0319LQ8IZA0 1049 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 Q8N1Y9 231 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 FAM43AQ8N2R8 423 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 OXR1Q8N573 874 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 NUP43Q8NFH3 380 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 TSPEARQ8WU66 669 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 NRG4Q8WWG1 115 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 ASB15Q8WXK1 588 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 SSH1Q8WYL5 1049 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 DPF2Q92785 391 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 KAT5Q92993 513 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 COA7Q96BR5 231 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 SYTL4Q96C24 671 aaPredicted RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 PGBD4Q96DM1 585 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 C1GALT1C1Q96EU7 318 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 RAX2Q96IS3 184 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MAP6Q96JE9 813 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 HHIPL1Q96JK4 782 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 SGCZQ96LD1 299 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 RIPOR3Q96MK2 946 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 GBP4Q96PP9 640 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 CGRRF1Q99675 332 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 HERPUD2Q9BSE4 406 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 LRFN3Q9BTN0 628 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 OSBPL1AQ9BXW6 950 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 ACE2Q9BYF1 805 aaPredicted RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 KRTAP4-5Q9BYR2 181 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 VPS11Q9H270 941 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 TMEM60Q9H2L4 133 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 ARMT1Q9H993 441 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 IFT122Q9HBG6 1241 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 DMRT3Q9NQL9 472 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 USP36Q9P275 1121 aaKnown RBP2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 MYOTQ9UBF9 498 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 TNFRSF10DQ9UBN6 386 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 STAP2Q9UGK3 403 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 CDC23Q9UJX2 597 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 USP18Q9UMW8 372 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 LIMCH1Q9UPQ0 1083 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 RAXQ9Y2V3 346 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 IPPQ9Y573 584 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 PCDHGB3Q9Y5G1 929 aa2.34□□□□□ -2.03
SNORA48.1-201ENST00000390879 PITPNM2Q9BZ72 1349 aa2.34□□□□□ -2.04
SNORA48.1-201ENST00000390879 CAPN8A6NHC0 703 aa2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 LRRC10BA6NIK2 292 aa2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 FADS2P1A8MWK0 482 aa2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 RASA4BC9J798 803 aa2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 GOLIM4O00461 696 aa2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 HGSO14964 777 aaPredicted RBP2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 RASA4O43374 803 aa2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 HTRA2O43464 458 aaPredicted RBP2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 NCK2O43639 380 aa2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 MGEA5O60502 916 aa2.33□□□□□ -2.04
SNORA48.1-201ENST00000390879 MAFKO60675 156 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms