RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 ZNF215Q9UL58 517 aaPredicted RBP27.14■■□□□ 1.94
ECHDC3-201ENST00000379215 FAM184BQ9ULE4 1060 aa27.14■■□□□ 1.94
ECHDC3-201ENST00000379215 WDR81Q562E7 1941 aa27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 HOXD8P13378 290 aaPredicted RBP27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 CDK11BP21127 795 aaKnown RBP27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 POLGP54098 1239 aaPredicted RBP27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 MTERF2Q49AM1 385 aa27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 EPM2AIP1Q7L775 607 aaPredicted RBP27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 ANKRD20A12PQ8NF67 263 aa27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 AFG1LQ8WV93 481 aa27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 THAP9Q9H5L6 903 aa27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 PCDHB13Q9Y5F0 798 aa27.13■■□□□ 1.93
ECHDC3-201ENST00000379215 MYH9P35579 1960 aaKnown RBP27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 CBFA2T2O43439 604 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 GCNT3O95395 438 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 TMEM63BQ5T3F8 832 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 FAM102BQ5T8I3 360 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 CDKAL1Q5VV42 579 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 FAM114A1Q8IWE2 563 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 DAW1Q8N136 415 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 SCFD1Q8WVM8 642 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 PDLIM2Q96JY6 352 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 PPP1R9BQ96SB3 815 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 JPH2Q9BR39 696 aaPredicted RBP27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 GAS2O43903 313 aaKnown RBP27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 LGALS2P05162 132 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 TPM3P06753 285 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 ABCD1P33897 745 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 PRKCZQ05513 592 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 LRRC41Q15345 812 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 DGKDQ16760 1214 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 BRDTQ58F21 947 aaPredicted RBP27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 PDLIM7Q9NR12 457 aa27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 GNEQ9Y223 722 aaKnown RBP27.12■■□□□ 1.93
ECHDC3-201ENST00000379215 DOCK3Q8IZD9 2030 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 HBP1O60381 514 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 AKR1A1P14550 325 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 SCP2P22307 547 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 ZNF75DP51815 510 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 DMP1Q13316 513 aaPredicted RBP27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 EMC2Q15006 297 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 TARBP2Q15633 366 aaKnown RBP27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 GJC2Q5T442 439 aaPredicted RBP27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 CSGALNACT2Q8N6G5 542 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 ZNF507Q8TCN5 953 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 ERO1AQ96HE7 468 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 MRFAP1L1Q96HT8 127 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 CTAGE1Q96RT6 745 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 SH2D3AQ9BRG2 576 aa27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 DHX33Q9H6R0 707 aaKnown RBP27.11■■□□□ 1.93
ECHDC3-201ENST00000379215 CASP8AP2Q9UKL3 1982 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 ARID2Q68CP9 1835 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 TRIM49BA6NDI0 452 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 SFI1A8K8P3 1242 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 GPR25O00155 361 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 SERPINC1P01008 464 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 MMP3P08254 477 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 SMTNP53814 917 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 FANCCQ00597 558 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 PLCB4Q15147 1175 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 PRAMEF19Q5SWL8 479 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 ANKRD40Q6AI12 368 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 MAEAQ7L5Y9 396 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 ZNF720Q7Z2F6 126 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 SEMA6BQ9H3T3 888 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 ST6GALNAC4Q9H4F1 302 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 SAMSN1Q9NSI8 373 aaKnown RBP27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 GABRQQ9UN88 632 aa27.1■■□□□ 1.93
ECHDC3-201ENST00000379215 H0YCG3 227 aa27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 AP5Z1O43299 807 aa27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 PMS1P54277 932 aaKnown RBP27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 KNOP1Q1ED39 458 aaKnown RBP27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 TLK2Q86UE8 772 aa27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 TRIM50Q86XT4 487 aa27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 GLIS3Q8NEA6 775 aa27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 SPIRE2Q8WWL2 714 aa27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 MAGEC2Q9UBF1 373 aaPredicted RBP27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 SRRDQ9UH36 339 aa27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 TRPC6Q9Y210 931 aa27.09■■□□□ 1.93
ECHDC3-201ENST00000379215 CDC25BP30305 580 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 CPT1AP50416 773 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 EDRF1Q3B7T1 1238 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 IFT74Q96LB3 600 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 FIZ1Q96SL8 496 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 FGFBP2Q9BYJ0 223 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 AP5M1Q9H0R1 490 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 A6NJR5 290 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 K7ENM7 598 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 MYBP10242 640 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 ATP1A3P13637 1013 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 EEF1GP26641 437 aaKnown RBP27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 MARK3P27448 753 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 CASP5P51878 434 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 TBC1D8BQ0IIM8 1120 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 ZCWPW2Q504Y3 356 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 TRIB2Q92519 343 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 HVCN1Q96D96 273 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 CEP89Q96ST8 783 aa27.08■■□□□ 1.93
ECHDC3-201ENST00000379215 DUSP9Q99956 384 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms