RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CDAN1Q8IWY9 1227 aa14.08□□□□□ -0.16
USP11-204ENST00000377107 USP38Q8NB14 1042 aa14.08□□□□□ -0.16
USP11-204ENST00000377107 TRIM51Q9BSJ1 452 aa14.08□□□□□ -0.16
USP11-204ENST00000377107 E7EVH7 732 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 KIAA0754O94854 1291 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 FOSP01100 380 aaPredicted RBP14.07□□□□□ -0.16
USP11-204ENST00000377107 HOXD13P35453 343 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 GCLMP48507 274 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 RRP1BQ14684 758 aaKnown RBP14.07□□□□□ -0.16
USP11-204ENST00000377107 EDRF1Q3B7T1 1238 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 IRF2BP2Q7Z5L9 587 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 CCDC25Q86WR0 208 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 EDEM3Q9BZQ6 932 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 ARHGEF10LQ9HCE6 1279 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 UBE2TQ9NPD8 197 aaPredicted RBP14.07□□□□□ -0.16
USP11-204ENST00000377107 AMFRQ9UKV5 643 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 ATP8A1Q9Y2Q0 1164 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 PGRMC1O00264 195 aaKnown RBP14.07□□□□□ -0.16
USP11-204ENST00000377107 FRMD5Q7Z6J6 570 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 SLC35C1Q96A29 364 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 ACP6Q9NPH0 428 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 TMEM51Q9NW97 253 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 CCDC169A6NNP5 214 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 PDXKO00764 312 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 RGL2O15211 777 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 ALAS1P13196 640 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 COBLL1Q53SF7 1204 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 ZDHHC15Q96MV8 337 aa14.07□□□□□ -0.16
USP11-204ENST00000377107 METTL14Q9HCE5 456 aaKnown RBP14.07□□□□□ -0.16
USP11-204ENST00000377107 ATMINO43313 823 aaPredicted RBP14.06□□□□□ -0.16
USP11-204ENST00000377107 PRLRP16471 622 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 ZFYVE27Q5T4F4 411 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 PPP4R3CPQ6ZMV5 832 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 OGFOD1Q8N543 542 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 RNPC3Q96LT9 517 aaKnown RBP14.06□□□□□ -0.16
USP11-204ENST00000377107 FAM20AQ96MK3 541 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 WDR18Q9BV38 432 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 ASTN1O14525 1302 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 EYA4O95677 639 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 MESDQ14696 234 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 KRT71Q3SY84 523 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 LMBR1Q8WVP7 490 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 GLIS2Q9BZE0 524 aaPredicted RBP14.06□□□□□ -0.16
USP11-204ENST00000377107 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 DDX3XO00571 662 aaKnown RBP eCLIP14.06□□□□□ -0.16
USP11-204ENST00000377107 LCA5LO95447 670 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 NR1D1P20393 614 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 ERVK-9P63128 1117 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 MYL7Q01449 175 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 TTC31Q49AM3 519 aaPredicted RBP14.06□□□□□ -0.16
USP11-204ENST00000377107 CBWD6Q4V339 395 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 CBWD3Q5JTY5 395 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 CBWD5Q5RIA9 395 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 PPM1KQ8N3J5 372 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 SLC35G2Q8TBE7 412 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 LXNQ9BS40 222 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 TAS2R14Q9NYV8 317 aa14.06□□□□□ -0.16
USP11-204ENST00000377107 ZNF233A6NK53 670 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 BUB1BO60566 1050 aaPredicted RBP14.05□□□□□ -0.16
USP11-204ENST00000377107 SLITRK3O94933 977 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 MYZAPP0CAP1 466 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 SREBF1P36956 1147 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 DHX9Q08211 1270 aaKnown RBP14.05□□□□□ -0.16
USP11-204ENST00000377107 DGKZQ13574 1117 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 CC2D2BQ6DHV5 1058 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 MIER3Q7Z3K6 550 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 TPCN2Q8NHX9 752 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 GLG1Q92896 1179 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 AGBL1Q96MI9 1066 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 PTPN22Q9Y2R2 807 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 SUGT1Q9Y2Z0 365 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 FAM169AQ9Y6X4 670 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 PITPNM2Q9BZ72 1349 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 MYH1P12882 1939 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 TMOD1P28289 359 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 SPIRE1Q08AE8 756 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 EPHA7Q15375 998 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 DLGAP5Q15398 846 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 KIAA1755Q5JYT7 1200 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 ALS2CLQ60I27 953 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 NSMFQ6X4W1 530 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 TAX1BP1Q86VP1 789 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 LENG9Q96B70 501 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 CEP89Q96ST8 783 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 TMEM39BQ9GZU3 492 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 FBXL5Q9UKA1 691 aa14.05□□□□□ -0.16
USP11-204ENST00000377107 ZC3H4Q9UPT8 1303 aaKnown RBP14.05□□□□□ -0.16
USP11-204ENST00000377107 EIF2AK2P19525 551 aaKnown RBP14.04□□□□□ -0.16
USP11-204ENST00000377107 GJC1P36383 396 aa14.04□□□□□ -0.16
USP11-204ENST00000377107 SSR1P43307 286 aaKnown RBP14.04□□□□□ -0.16
USP11-204ENST00000377107 PLTPP55058 493 aa14.04□□□□□ -0.16
USP11-204ENST00000377107 INPP4AQ96PE3 977 aaPredicted RBP14.04□□□□□ -0.16
USP11-204ENST00000377107 CCPG1Q9ULG6 757 aa14.04□□□□□ -0.16
USP11-204ENST00000377107 NAV1Q8NEY1 1877 aa14.04□□□□□ -0.16
USP11-204ENST00000377107 IPO5O00410 1097 aaKnown RBP14.04□□□□□ -0.16
USP11-204ENST00000377107 TGFB1I1O43294 461 aa14.04□□□□□ -0.16
USP11-204ENST00000377107 HIP1RO75146 1068 aa14.04□□□□□ -0.16
USP11-204ENST00000377107 HSPA1LP34931 641 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms