RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 CDKL5O76039 1030 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 GATMP50440 423 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 NLRP11P59045 1033 aaKnown RBP16.05■□□□□ 0.16
NELFE-201ENST00000375425 PRKCEQ02156 737 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 NONOQ15233 471 aaKnown RBP eCLIP16.05■□□□□ 0.16
NELFE-201ENST00000375425 EP400NLQ6ZTU2 488 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 SLC24A5Q71RS6 500 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 MIER3Q7Z3K6 550 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 FAM228AQ86W67 206 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 LRRC71Q8N4P6 559 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 LINC01465Q8N7H1 131 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 NEK9Q8TD19 979 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 LMAN2LQ9H0V9 348 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 C1orf112Q9NSG2 853 aa16.05■□□□□ 0.16
NELFE-201ENST00000375425 H3BQ06 376 aaPredicted RBP16.04■□□□□ 0.16
NELFE-201ENST00000375425 PFKFB2O60825 505 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 DTNBO60941 627 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 CSPG5O95196 566 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 CAMK1Q14012 370 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 INF2Q27J81 1249 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 NAALADL2Q58DX5 795 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 MOXD1Q6UVY6 613 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 B3GNT9Q6UX72 402 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 P2RX5Q93086 422 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 PABPC5Q96DU9 382 aaKnown RBP16.04■□□□□ 0.16
NELFE-201ENST00000375425 MBOAT7Q96N66 472 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 MAP7D2Q96T17 732 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 PHF20Q9BVI0 1012 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 ADAMTS10Q9H324 1103 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 C5orf42Q9H799 3197 aa16.04■□□□□ 0.16
NELFE-201ENST00000375425 C9IYK1 514 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 ANAPC15P60006 121 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 COL19A1Q14993 1142 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 FAM102BQ5T8I3 360 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 ERICH6BQ5W0A0 696 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 PTCRAQ6ISU1 281 aaPredicted RBP16.03■□□□□ 0.16
NELFE-201ENST00000375425 KRT25Q7Z3Z0 450 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 KLHL23Q8NBE8 558 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 RDM1Q8NG50 284 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 ETNPPLQ8TBG4 499 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 SPPL3Q8TCT6 385 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 ZNF668Q96K58 619 aaPredicted RBP16.03■□□□□ 0.16
NELFE-201ENST00000375425 GJB4Q9NTQ9 266 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
NELFE-201ENST00000375425 CLDND1Q9NY35 253 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 DDX25Q9UHL0 483 aaKnown RBP16.03■□□□□ 0.16
NELFE-201ENST00000375425 MYO7AQ13402 2215 aa16.03■□□□□ 0.16
NELFE-201ENST00000375425 GRXCR2A6NFK2 248 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 TBKBP1A7MCY6 615 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 NCK2O43639 380 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 MMP1P03956 469 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 ITGB1P05556 798 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 XBP1P17861 261 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 EIF4BP23588 611 aaKnown RBP16.02■□□□□ 0.16
NELFE-201ENST00000375425 DNAJB1P25685 340 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 FAM189BP81408 668 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 TBC1D8BQ0IIM8 1120 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 HYAL1Q12794 435 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 DSC3Q14574 896 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 TARBP2Q15633 366 aaKnown RBP16.02■□□□□ 0.16
NELFE-201ENST00000375425 LETM2Q2VYF4 491 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 ZNF710Q8N1W2 664 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 NIFKQ9BYG3 293 aaKnown RBP16.02■□□□□ 0.16
NELFE-201ENST00000375425 CD320Q9NPF0 282 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 EVPLQ92817 2033 aa16.02■□□□□ 0.16
NELFE-201ENST00000375425 CCDC194A0A1B0GVG4 234 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 SLC37A4O43826 429 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 STBD1O95210 358 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 CTDNEP1O95476 244 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 IL9P15248 144 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 LTBRP36941 435 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 GPC3P51654 580 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 AK2P54819 239 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 ANKRD1Q15327 319 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 PUS10Q3MIT2 529 aaKnown RBP16.02■□□□□ 0.15
NELFE-201ENST00000375425 XKR3Q5GH77 459 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 FAM178BQ8IXR5 827 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 POF1BQ8WVV4 589 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 SH2D3AQ9BRG2 576 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 IGFLR1Q9H665 355 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 ATP6V0A4Q9HBG4 840 aa16.02■□□□□ 0.15
NELFE-201ENST00000375425 SEPT9Q9UHD8 586 aaPredicted RBP16.02■□□□□ 0.15
NELFE-201ENST00000375425 STK36Q9NRP7 1315 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 MYH9P35579 1960 aaKnown RBP16.01■□□□□ 0.15
NELFE-201ENST00000375425 NLRC5Q86WI3 1866 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 TMEM150BA6NC51 233 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 FGFR1P11362 822 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 ZSCAN20P17040 1043 aaPredicted RBP16.01■□□□□ 0.15
NELFE-201ENST00000375425 GTF2F1P35269 517 aaKnown RBP eCLIP16.01■□□□□ 0.15
NELFE-201ENST00000375425 DRP2Q13474 957 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 CTC1Q2NKJ3 1217 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 MTERF2Q49AM1 385 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 SPOUT1Q5T280 376 aaKnown RBP16.01■□□□□ 0.15
NELFE-201ENST00000375425 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 CEP89Q96ST8 783 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 EPHX3Q9H6B9 360 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 ELAC1Q9H777 363 aaKnown RBP16.01■□□□□ 0.15
NELFE-201ENST00000375425 TYW1Q9NV66 732 aaKnown RBP16.01■□□□□ 0.15
NELFE-201ENST00000375425 TMEM161AQ9NX61 479 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms