RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 VAMP7P51809 220 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 DYNLT1P63172 113 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 PLSCR1O15162 318 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 XPOTO43592 962 aaKnown RBP19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 HOXA10P31260 410 aaPredicted RBP19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 MXRA7P84157 204 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 SLC7A5Q01650 507 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 DENND2CQ68D51 928 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 FASTKD5Q7L8L6 764 aaKnown RBP19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 AP1M1Q9BXS5 423 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 PCDHAC2Q9Y5I4 1007 aa19.42■□□□□ 0.7
PTPDC1-202ENST00000375360 HEXIM1O94992 359 aaKnown RBP19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 ZSCAN20P17040 1043 aaPredicted RBP19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 TRIM50Q86XT4 487 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 HEXIM2Q96MH2 286 aaKnown RBP19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 KCNH7Q9NS40 1196 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 FAM217BQ9NTX9 383 aaPredicted RBP19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 SEL1LQ9UBV2 794 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 PABPN1LA6NDY0 278 aaKnown RBP19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 SHMT1P34896 483 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 CCDC14Q49A88 953 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 APOBEC3HQ6NTF7 200 aaKnown RBP19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 MGARPQ8TDB4 240 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 DRAP1Q14919 205 aaPredicted RBP19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 ANKS4BQ8N8V4 417 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 RNF149Q8NC42 400 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 FBF1Q8TES7 1133 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 FAM167AQ96KS9 214 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 CEP72Q9P209 647 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 RHOBTB3O94955 611 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 IVLP07476 585 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 ATP1A2P50993 1020 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 RNASELQ05823 741 aaKnown RBP19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 DNAJC24Q6P3W2 148 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 TMEM270Q6UE05 265 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 TCP11Q8WWU5 503 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 SREK1Q8WXA9 508 aaKnown RBP19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 SNX25Q9H3E2 840 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 ADGRG1Q9Y653 693 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 AK9Q5TCS8 1911 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 PHLPP2Q6ZVD8 1323 aa19.41■□□□□ 0.7
PTPDC1-202ENST00000375360 RPS12P25398 132 aaKnown RBP19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 OR6B2Q6IFH4 312 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 CCDC125Q86Z20 511 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 NME8Q8N427 588 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 GIMAP8Q8ND71 665 aaPredicted RBP19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 EMSYQ7Z589 1322 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 ESYT2A0FGR8 921 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 DDNO94850 711 aaPredicted RBP19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 VEGFAP15692 232 aaPredicted RBP19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 SMARCA1P28370 1054 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 FXR1P51114 621 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 C7orf25Q9BPX7 421 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 CALN1Q9BXU9 219 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 ZNF667Q5HYK9 610 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 CATSPER3Q86XQ3 398 aa19.4■□□□□ 0.7
PTPDC1-202ENST00000375360 H7C0C1 242 aa19.39■□□□□ 0.7
PTPDC1-202ENST00000375360 MYBP10242 640 aa19.39■□□□□ 0.7
PTPDC1-202ENST00000375360 ATP5OP48047 213 aa19.39■□□□□ 0.7
PTPDC1-202ENST00000375360 PPFIA1Q13136 1202 aa19.39■□□□□ 0.7
PTPDC1-202ENST00000375360 DACT2Q5SW24 774 aa19.39■□□□□ 0.7
PTPDC1-202ENST00000375360 KCTD16Q68DU8 428 aa19.39■□□□□ 0.7
PTPDC1-202ENST00000375360 AGPAT5Q9NUQ2 364 aa19.39■□□□□ 0.7
PTPDC1-202ENST00000375360 SAMD15Q9P1V8 674 aa19.39■□□□□ 0.7
PTPDC1-202ENST00000375360 FZD1Q9UP38 647 aa19.39■□□□□ 0.7
PTPDC1-202ENST00000375360 RSRC2Q7L4I2 434 aaKnown RBP19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 ANKRD42Q8N9B4 389 aa19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 PGRMC1O00264 195 aaKnown RBP19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 LDHAP00338 332 aaKnown RBP19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 PLTPP55058 493 aa19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 ARPP19P56211 112 aa19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 CLUL1Q15846 466 aa19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 OR6B3Q8NGW1 331 aa19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 TUFT1Q9NNX1 390 aa19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 SEPT10Q9P0V9 454 aa19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 TWF2Q6IBS0 349 aaKnown RBP19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 CCDC121Q6ZUS5 278 aa19.39■□□□□ 0.69
PTPDC1-202ENST00000375360 PALMO75781 387 aa19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 SSTR3P32745 418 aaPredicted RBP19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 GLYCTKQ8IVS8 523 aa19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 MXRA8Q9BRK3 442 aa19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 PARD6BQ9BYG5 372 aa19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 PDE11AQ9HCR9 933 aa19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 WNT10BO00744 389 aa19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 MSH4O15457 936 aa19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 RPA1P27694 616 aa19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 ACOT2P49753 483 aa19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 BUB1BO60566 1050 aaPredicted RBP19.38■□□□□ 0.69
PTPDC1-202ENST00000375360 LRRD1A4D1F6 860 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 RGS16O15492 202 aaPredicted RBP19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 MYO1EQ12965 1108 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 TRIP13Q15645 432 aaPredicted RBP19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 CERS5Q8N5B7 392 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 MIS12Q9H081 205 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 INPP5FQ9Y2H2 1132 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 DAAM1Q9Y4D1 1078 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 TBX3O15119 743 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 ACTN1P12814 892 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 TAF1CQ15572 869 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms