RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 YWHAGP61981 247 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 UBE2SQ16763 222 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 IWS1Q96ST2 819 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 HAUS5O94927 633 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 MRPS35P82673 323 aaKnown RBP17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 PREPLQ4J6C6 727 aaPredicted RBP17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 ASPRV1Q53RT3 343 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 MIEF2Q96C03 454 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 KDM4CQ9H3R0 1056 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 PNPLA7Q6ZV29 1317 aa17.18■□□□□ 0.34
CLSTN1-201ENST00000361311 E9PMD0 336 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 RIMBP2O15034 1052 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 CDK17Q00537 523 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 SP4Q02446 784 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 FIGNQ5HY92 759 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 RNF207Q6ZRF8 634 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 C1orf112Q9NSG2 853 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 TMOD4Q9NZQ9 345 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 ARHGAP20Q9P2F6 1191 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 hCG_1984214I3L0E3 225 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 CPP00450 1065 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 FAM153BP0C7A2 387 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 PLS3P13797 630 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 NQO1P15559 274 aaKnown RBP17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 TNNI1P19237 187 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 FAM153CQ494X1 144 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 TTMPQ5BVD1 217 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 CREG2Q8IUH2 290 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 TEX9Q8N6V9 391 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 ZNF713Q8N859 430 aaPredicted RBP17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 SMC1BQ8NDV3 1235 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 FAM153AQ9UHL3 310 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 SGK1O00141 431 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 ATP6V1G2O95670 118 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 TTI2Q6NXR4 508 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 TMEM154Q6P9G4 183 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 AGGF1Q8N302 714 aaeCLIP17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 STAMBPL1Q96FJ0 436 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 SAYSD1Q9NPB0 183 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 BARHL2Q9NY43 387 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 MDM2Q00987 491 aaPredicted RBP17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 NR1H3Q13133 447 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 CUL3Q13618 768 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 SLC29A2Q14542 456 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 CASC4Q6P4E1 433 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 NT5C1BQ96P26 610 aa17.17■□□□□ 0.34
CLSTN1-201ENST00000361311 FAM237AA0A1B0GTK4 181 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 NR3C1P04150 777 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 COPS2P61201 443 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 TMED1Q13445 227 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 HLFQ16534 295 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 CCDC14Q49A88 953 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 NSMFQ6X4W1 530 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 TRPC6Q9Y210 931 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 MECOMQ03112 1051 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 YTHDF3Q7Z739 585 aaKnown RBP17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 MAML1Q92585 1016 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 ERP27Q96DN0 273 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 ABL1P00519 1130 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 DLATP10515 647 aaKnown RBP17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 GPC5P78333 572 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 LONRF1Q17RB8 773 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 DNAJC9Q8WXX5 260 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 ERP44Q9BS26 406 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 FAM53CQ9NYF3 392 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 TMEM120BA0PK00 339 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 GSTA1P08263 222 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 PTK2Q05397 1052 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 DRAP1Q14919 205 aaPredicted RBP17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 DNAI2Q9GZS0 605 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 BHMT2Q9H2M3 363 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 THEGQ9P2T0 379 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 PCDHA6Q9UN73 950 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 PCDHA8Q9Y5H6 950 aa17.16■□□□□ 0.34
CLSTN1-201ENST00000361311 CD19P15391 556 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 BTDP43251 543 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 CTCFP49711 727 aaPredicted RBP17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 GALCP54803 685 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 TPD52P55327 224 aaPredicted RBP17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 SFR1Q86XK3 245 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 ARHGAP18Q8N392 663 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 LBHD1Q9BQE6 289 aaPredicted RBP17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 A0A087X0T9 212 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 ORC4O43929 436 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 FAM228BP0C875 321 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 RFC1P35251 1148 aaPredicted RBP17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 EP400NLQ6ZTU2 488 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 TRIM42Q8IWZ5 723 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 METTL13Q8N6R0 699 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 HAUS1Q96CS2 278 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 PCIF1Q9H4Z3 704 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 DLGAP2Q9P1A6 1054 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 CFAP69A5D8W1 941 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 LRRC10BA6NIK2 292 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 ITIH4Q14624 930 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms