RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 BBS9Q3SYG4 887 aa21.8■■□□□ 1.08
CDC42BPB-201ENST00000361246 RNF10Q8N5U6 811 aaKnown RBP21.8■■□□□ 1.08
CDC42BPB-201ENST00000361246 STK17AQ9UEE5 414 aa21.8■■□□□ 1.08
CDC42BPB-201ENST00000361246 UTYO14607 1347 aa21.8■■□□□ 1.08
CDC42BPB-201ENST00000361246 CFAP61Q8NHU2 1237 aa21.8■■□□□ 1.08
CDC42BPB-201ENST00000361246 TUBBP07437 444 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 PODNQ7Z5L7 613 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 DHTKD1Q96HY7 919 aaPredicted RBP21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 STRBPQ96SI9 672 aaKnown RBP21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 MRPL47Q9HD33 250 aaKnown RBP21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 KLHL14Q9P2G3 628 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 PSMD14O00487 310 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 NNMTP40261 264 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 KCNA1Q09470 495 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 TCP11X2Q5H9J9 407 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 CC2D1AQ6P1N0 951 aaPredicted RBP21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 NHEJ1Q9H9Q4 299 aaPredicted RBP21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 DEFB132Q7Z7B7 95 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 ACAD9Q9H845 621 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 GCOM2Q9BZD3 368 aaPredicted RBP21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 ZCWPW1Q9H0M4 648 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 SLC10A5Q5PT55 438 aa21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 FKBP3Q00688 224 aaKnown RBP21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 TOPORSQ9NS56 1045 aaPredicted RBP21.79■■□□□ 1.08
CDC42BPB-201ENST00000361246 SLFN12LQ6IEE8 588 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 RNF135Q8IUD6 432 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 BHMTQ93088 406 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 OPHN1O60890 802 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 TADA2AO75478 443 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 SHROOM2Q13796 1616 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 SMIM24O75264 130 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 TRIML1Q8N9V2 468 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 LINC00116Q8NCU8 138 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 SLC4A7Q9Y6M7 1214 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 DRP2Q13474 957 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 TRIM11Q96F44 468 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 ZFYVE28Q9HCC9 887 aa21.78■■□□□ 1.08
CDC42BPB-201ENST00000361246 AKR1B1P15121 316 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 STX1BP61266 288 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 WDR48Q8TAF3 677 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 SNX19Q92543 992 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 FBXO40Q9UH90 709 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 MAGI3Q5TCQ9 1506 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 KIAA1755Q5JYT7 1200 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 SUCLA2Q9P2R7 463 aaPredicted RBP21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 SURF1Q15526 300 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 CUEDC2Q9H467 287 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 MUM1Q2TAK8 710 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 STAG2Q8N3U4 1231 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 SDCCAG3Q96C92 435 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 IQCDQ96DY2 449 aa21.77■■□□□ 1.08
CDC42BPB-201ENST00000361246 PP2D1A8MPX8 630 aa21.77■■□□□ 1.07
CDC42BPB-201ENST00000361246 ECEL1O95672 775 aa21.77■■□□□ 1.07
CDC42BPB-201ENST00000361246 KIF19Q2TAC6 998 aa21.77■■□□□ 1.07
CDC42BPB-201ENST00000361246 CFLARO15519 480 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 DPEP1P16444 411 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 ZNF746Q6NUN9 644 aaPredicted RBP21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 NDUFAF2Q8N183 169 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 DPF3Q92784 378 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 EDEM3Q9BZQ6 932 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 H7C1W4 665 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 ASIC4Q96FT7 647 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 SP110Q9HB58 689 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 A8MXQ7 604 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 VCPP55072 806 aaKnown RBP21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 PBXIP1Q96AQ6 731 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 SH3KBP1Q96B97 665 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 DYRK4Q9NR20 520 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 TNFAIP2Q03169 654 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 LXNQ9BS40 222 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 CFAP69A5D8W1 941 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 WHAMMP3Q1A5X7 153 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 LMNTD2Q8IXW0 634 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 PPWD1Q96BP3 646 aaKnown RBP21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 INTUQ9ULD6 942 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 PCDHA13Q9Y5I0 950 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 UBE4BO95155 1302 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 PRR23AA6NEV1 266 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 CD2BP2O95400 341 aaKnown RBP21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 ASMTLO95671 621 aa21.76■■□□□ 1.07
CDC42BPB-201ENST00000361246 RGS12O14924 1447 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 MAGEF1Q9HAY2 307 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 DCP1AQ9NPI6 582 aaPredicted RBP21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 ANAPC7Q9UJX3 599 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 SERPIND1P05546 499 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 NOP14P78316 857 aaKnown RBP21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 TAS2R42Q7RTR8 314 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 CROCCP2Q86T23 111 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 RNF149Q8NC42 400 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 TMEM143Q96AN5 459 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 SART1O43290 800 aaKnown RBP21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 RARBP10826 455 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 QRICH1Q2TAL8 776 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 SEPT5Q99719 369 aaPredicted RBP21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 SLC13A4Q9UKG4 626 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 GMPSP49915 693 aaPredicted RBP21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 DAAM1Q9Y4D1 1078 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 IGKV5-2P06315 115 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 KITP10721 976 aa21.75■■□□□ 1.07
CDC42BPB-201ENST00000361246 TTC7AQ9ULT0 858 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms