RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 HTR3BO95264 441 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 POLR3DP05423 398 aaPredicted RBP2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 BMPR1AP36894 532 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 SHC2P98077 582 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 AP3B2Q13367 1082 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 UBE3CQ15386 1083 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 HIBCHQ6NVY1 386 aaPredicted RBP2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 MAMDC2Q7Z304 686 aaPredicted RBP2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 C7orf61Q8IZ16 206 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 IL31RAQ8NI17 732 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 OTUD7AQ8TE49 926 aaPredicted RBP2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 TRIM52Q96A61 297 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 TRIM55Q9BYV6 548 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 USP44Q9H0E7 712 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 SH2B1Q9NRF2 756 aaPredicted RBP2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 PNPLA3Q9NST1 481 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 FBXL7Q9UJT9 491 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZNF541Q9H0D2 1346 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 HFM1A2PYH4 1435 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 METTL12A8MUP2 240 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 SYT5O00445 386 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 HOXC11O43248 304 aaPredicted RBP2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 PTP4A3O75365 173 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 AVPP01185 164 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 RPS2P15880 293 aaKnown RBP2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 IGFALSP35858 605 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 ARL4CP56559 192 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 CTAG1AP78358 180 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 SFSWAPQ12872 951 aaKnown RBP2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 FBXO47Q5MNV8 452 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 SNX30Q5VWJ9 437 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 KSR2Q6VAB6 950 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 DPP9Q86TI2 863 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 RHBDD1Q8TEB9 315 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZNF516Q92618 1163 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 SNX21Q969T3 373 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 ALG14Q96F25 216 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 CDHR1Q96JP9 859 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 KIAA1586Q9HCI6 787 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 SH3GLB2Q9NR46 395 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 EXTL2Q9UBQ6 330 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 HERC5Q9UII4 1024 aaKnown RBP2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 ODF2LQ9ULJ1 636 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 LIMCH1Q9UPQ0 1083 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 TELO2Q9Y4R8 837 aa2.31□□□□□ -2.04
SMARCAD1-202ENST00000359052 ADARB2-AS1A8MUL3 147 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 A8MXE2 369 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 NT5C1B-RDH14C9J2C7 533 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 RGS13O14921 159 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 RECQLP46063 649 aaPredicted RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 DNM2P50570 870 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 SPECC1Q5M775 1068 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 CYP4F22Q6NT55 531 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZNF713Q8N859 430 aaPredicted RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ENAHQ8N8S7 591 aaPredicted RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 WNK4Q96J92 1243 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 SMG9Q9H0W8 520 aaKnown RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ADAMTS13Q76LX8 1427 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 UBR3Q6ZT12 1888 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 NOTOA8MTQ0 251 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 C1QTNF9P0C862 333 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 CIITAP33076 1130 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 IDH3AP50213 366 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 SUMO1P63165 101 aaKnown RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 BECN1Q14457 450 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 NCAPHQ15003 741 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 MPEG1Q2M385 716 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 WSCD2Q2TBF2 565 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 IZUMO3Q5VZ72 239 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZSCAN30Q86W11 494 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 NBPF15Q8N660 670 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 WDR66Q8TBY9 1149 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZBTB10Q96DT7 871 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 IFT22Q9H7X7 185 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ITM2CQ9NQX7 267 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 SIK3Q9Y2K2 1263 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 TLL2Q9Y6L7 1015 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 FOCADQ5VW36 1801 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ARHGAP5Q13017 1502 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 SPTBN5Q9NRC6 3674 aaKnown RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 AXIN1O15169 862 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 MMP20O60882 483 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 AGR2O95994 175 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 HNRNPCP07910 306 aaKnown RBP eCLIP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ESRRAP11474 423 aaPredicted RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 KCNA3P22001 575 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 CTSOP43234 321 aaPredicted RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ADAM8P78325 824 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 RBM10P98175 930 aaKnown RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 TCIRG1Q13488 830 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ANGEL2Q5VTE6 544 aaKnown RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 DLK2Q6UY11 383 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ANKLE1Q8NAG6 615 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZBTB34Q8NCN2 500 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 FAM13CQ8NE31 585 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 PMEPA1Q969W9 287 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 MRGPRX4Q96LA9 322 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 MTRQ99707 1265 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ENKD1Q9H0I2 346 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ST7Q9NRC1 585 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms