RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ZNHIT2Q9UHR6 403 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 LRRIQ1Q96JM4 1722 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 ARPC4-TTLL3A0A0A6YYG9 625 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 SMIM23A6NLE4 172 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 LIFRP42702 1097 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 HSPA14Q0VDF9 509 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 CROCCP2Q86T23 111 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 CREG2Q8IUH2 290 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 CRACR2BQ8N4Y2 399 aaPredicted RBP9.25□□□□□ -0.93
TDP1-201ENST00000335725 PYROXD1Q8WU10 500 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 CDHR1Q96JP9 859 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 EPB41L5Q9HCM4 733 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 ZNF212Q9UDV6 495 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 COQ6Q9Y2Z9 468 aa9.25□□□□□ -0.93
TDP1-201ENST00000335725 NOSIPQ9Y314 301 aaKnown RBP9.25□□□□□ -0.93
TDP1-201ENST00000335725 KNDC1Q76NI1 1749 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 MAGI3Q5TCQ9 1506 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 A2MP01023 1474 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 PFDN6O15212 129 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 ZNF12P17014 697 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 PPARGP37231 505 aaPredicted RBP9.24□□□□□ -0.93
TDP1-201ENST00000335725 SYKP43405 635 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 RXRGP48443 463 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 CARSP49589 748 aaKnown RBP9.24□□□□□ -0.93
TDP1-201ENST00000335725 HSD17B4P51659 736 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 DPYSQ14117 519 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 LPIN1Q14693 890 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 MIER3Q7Z3K6 550 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 OSTM1Q86WC4 334 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 ATL1Q8WXF7 558 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 DNAI2Q9GZS0 605 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 INTS9Q9NV88 658 aaKnown RBP9.24□□□□□ -0.93
TDP1-201ENST00000335725 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 HYOU1Q9Y4L1 999 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 TARBP1Q13395 1621 aaKnown RBP9.24□□□□□ -0.93
TDP1-201ENST00000335725 GOLGA8BA8MQT2 603 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 SYCE1LA8MT33 242 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 HEXIM1O94992 359 aaKnown RBP9.24□□□□□ -0.93
TDP1-201ENST00000335725 GNA11P29992 359 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 GSSP48637 474 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 KRT6CP48668 564 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 TNNI2P48788 182 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 CLK1P49759 484 aaKnown RBP9.24□□□□□ -0.93
TDP1-201ENST00000335725 GJA9P57773 515 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 PPP4CP60510 307 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 PPP2R5BQ15173 497 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 RESP18Q5W5W9 173 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 CCBE1Q6UXH8 406 aaPredicted RBP9.24□□□□□ -0.93
TDP1-201ENST00000335725 VASH1Q7L8A9 365 aaPredicted RBP9.24□□□□□ -0.93
TDP1-201ENST00000335725 CHCHD4Q8N4Q1 142 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 FAM13CQ8NE31 585 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 GSDMBQ8TAX9 411 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 AIFM2Q9BRQ8 373 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 ERP44Q9BS26 406 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 CRNKL1Q9BZJ0 848 aaKnown RBP9.24□□□□□ -0.93
TDP1-201ENST00000335725 ABHD10Q9NUJ1 306 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 TBC1D23Q9NUY8 699 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 DCAF16Q9NXF7 216 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 STK32BQ9NY57 414 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 CLIC5Q9NZA1 410 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 SLAIN2Q9P270 581 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 KLHL14Q9P2G3 628 aa9.24□□□□□ -0.93
TDP1-201ENST00000335725 FUOMA2VDF0 154 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 ZNF185O15231 689 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 FOXD2O60548 495 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 DKC1O60832 514 aaKnown RBP eCLIP9.23□□□□□ -0.93
TDP1-201ENST00000335725 DTNBO60941 627 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 ADAM23O75077 832 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 GLI1P08151 1106 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 RASA1P20936 1047 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 BCAP31P51572 246 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 ZNF844Q08AG5 666 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 ADCK5Q3MIX3 580 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 PPP1R21Q6ZMI0 780 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 DNAJC1Q96KC8 554 aaKnown RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 PALMDQ9NP74 551 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 CCDC177Q9NQR7 707 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 GPHNQ9NQX3 736 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 RABGAP1Q9Y3P9 1069 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 H0YC42 278 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 ENO2P09104 434 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 MZF1P28698 734 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 CYLC1P35663 651 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 TPD52P55327 224 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 KRT71Q3SY84 523 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 ZC2HC1CQ53FD0 456 aaPredicted RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 TSHZ3Q63HK5 1081 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 PRPF31Q8WWY3 499 aaKnown RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 SDCCAG3Q96C92 435 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 MAP3K14Q99558 947 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 THAP9Q9H5L6 903 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 C12orf10Q9HB07 376 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 UVRAGQ9P2Y5 699 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 SCAF8Q9UPN6 1271 aaKnown RBP9.23□□□□□ -0.93
TDP1-201ENST00000335725 RIMS2Q9UQ26 1411 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 NEDD4P46934 1319 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 CCDC160A6NGH7 325 aa9.23□□□□□ -0.93
TDP1-201ENST00000335725 GJB6O95452 261 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms