RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GPR32O75388 356 aa30.98■■■□□ 2.55
ATPAF1-201ENST00000329231 ATP2B1P20020 1258 aa30.98■■■□□ 2.55
ATPAF1-201ENST00000329231 NFX1Q12986 1120 aaKnown RBP30.98■■■□□ 2.55
ATPAF1-201ENST00000329231 TMEM266Q2M3C6 531 aa30.98■■■□□ 2.55
ATPAF1-201ENST00000329231 SP7Q8TDD2 431 aaPredicted RBP30.98■■■□□ 2.55
ATPAF1-201ENST00000329231 OSMRQ99650 979 aa30.98■■■□□ 2.55
ATPAF1-201ENST00000329231 NOC2LQ9Y3T9 749 aaKnown RBP30.98■■■□□ 2.55
ATPAF1-201ENST00000329231 TMEM150BA6NC51 233 aa30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 GPR182O15218 404 aa30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 NLRP11P59045 1033 aaKnown RBP30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 ERVK-21P61565 698 aa30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 ANO5Q75V66 913 aa30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 TMEM40Q8WWA1 233 aa30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 CEP89Q96ST8 783 aa30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 TSPYL2Q9H2G4 693 aaPredicted RBP30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 TTC12Q9H892 705 aaPredicted RBP30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 ERVK-5Q9HDB9 667 aa30.97■■■□□ 2.55
ATPAF1-201ENST00000329231 EPOPA6NHQ4 379 aa30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 RFXAPO00287 272 aa30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 CD2BP2O95400 341 aaKnown RBP30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 MCM7P33993 719 aa30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 NOSTRINQ8IVI9 506 aa30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 C4orf19Q8IY42 314 aa30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 LINC01599Q8WXQ3 324 aa30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 MTMR9Q96QG7 549 aa30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 JPH2Q9BR39 696 aaPredicted RBP30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 LXNQ9BS40 222 aa30.96■■■□□ 2.55
ATPAF1-201ENST00000329231 GTPBP6O43824 516 aaPredicted RBP30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 TXKP42681 527 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 DNM2P50570 870 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 CDC42EP1Q00587 391 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 ORC2Q13416 577 aaPredicted RBP30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 SPRED2Q7Z698 418 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 RTN4RL1Q86UN2 441 aaPredicted RBP30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 SH2D3AQ9BRG2 576 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 ADAMTS10Q9H324 1103 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 TMX1Q9H3N1 280 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 ZSWIM4Q9H7M6 989 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 CYP26B1Q9NR63 512 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 RGL1Q9NZL6 768 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 ST3GAL5Q9UNP4 418 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 PPME1Q9Y570 386 aa30.95■■■□□ 2.55
ATPAF1-201ENST00000329231 CHD7Q9P2D1 2997 aa30.94■■■□□ 2.54
ATPAF1-201ENST00000329231 IGKV6-21A0A0C4DH24 114 aa30.94■■■□□ 2.54
ATPAF1-201ENST00000329231 MAFO75444 373 aaPredicted RBP30.94■■■□□ 2.54
ATPAF1-201ENST00000329231 DYDC2Q96IM9 177 aa30.94■■■□□ 2.54
ATPAF1-201ENST00000329231 WRAP73Q9P2S5 460 aaPredicted RBP30.94■■■□□ 2.54
ATPAF1-201ENST00000329231 MTUS1Q9ULD2 1270 aa30.94■■■□□ 2.54
ATPAF1-201ENST00000329231 POU3F3P20264 500 aaPredicted RBP30.93■■■□□ 2.54
ATPAF1-201ENST00000329231 TRAPPC10P48553 1259 aa30.93■■■□□ 2.54
ATPAF1-201ENST00000329231 GPC3P51654 580 aa30.93■■■□□ 2.54
ATPAF1-201ENST00000329231 PLA2G4FQ68DD2 849 aa30.93■■■□□ 2.54
ATPAF1-201ENST00000329231 OTUD6AQ7L8S5 288 aa30.93■■■□□ 2.54
ATPAF1-201ENST00000329231 EXOC8Q8IYI6 725 aa30.93■■■□□ 2.54
ATPAF1-201ENST00000329231 SCLT1Q96NL6 688 aa30.93■■■□□ 2.54
ATPAF1-201ENST00000329231 NOL7Q9UMY1 257 aaKnown RBP30.93■■■□□ 2.54
ATPAF1-201ENST00000329231 LOXHD1Q8IVV2 1947 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 STAG3L1P0CL83 205 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 EIF4BP23588 611 aaKnown RBP30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 YWHABP31946 246 aaKnown RBP30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 CYP4A11Q02928 519 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 CTTNQ14247 550 aaKnown RBP30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 FAM228AQ86W67 206 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 NPAS4Q8IUM7 802 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 TPH2Q8IWU9 490 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 NEK9Q8TD19 979 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 PPM1EQ8WY54 764 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 CEP170P1Q96L14 293 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 SAMD11Q96NU1 681 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 EIF2AK1Q9BQI3 630 aaKnown RBP30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 TMEM60Q9H2L4 133 aa30.92■■■□□ 2.54
ATPAF1-201ENST00000329231 TTC3P53804 2025 aa30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 DENND3A2RUS2 1198 aa30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 U2AF2P26368 475 aaKnown RBP eCLIP30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 NPEPPSP55786 919 aa30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 GRB10Q13322 594 aa30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 ZNF174Q15697 407 aa30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 NLRP7Q8WX94 980 aa30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 SLC7A3Q8WY07 619 aa30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 C1orf112Q9NSG2 853 aa30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 RNF216Q9NWF9 866 aaPredicted RBP30.91■■■□□ 2.54
ATPAF1-201ENST00000329231 COL4A6Q14031 1691 aa30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 SLITRK3O94933 977 aa30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 DRP2Q13474 957 aa30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 TTC38Q5R3I4 469 aa30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 FIBCD1Q8N539 461 aa30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 ADAM2Q99965 735 aa30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 HSD17B14Q9BPX1 270 aa30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 C17orf80Q9BSJ5 609 aa30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 SUCLA2Q9P2R7 463 aaPredicted RBP30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 MTCH2Q9Y6C9 303 aa30.9■■■□□ 2.54
ATPAF1-201ENST00000329231 DGKIO75912 1065 aa30.89■■■□□ 2.54
ATPAF1-201ENST00000329231 RFC5P40937 340 aa30.89■■■□□ 2.54
ATPAF1-201ENST00000329231 SARSP49591 514 aaKnown RBP30.89■■■□□ 2.54
ATPAF1-201ENST00000329231 CCDC85BQ15834 202 aaPredicted RBP30.89■■■□□ 2.54
ATPAF1-201ENST00000329231 CRIPAKQ8N1N5 446 aa30.89■■■□□ 2.54
ATPAF1-201ENST00000329231 FBXO22Q8NEZ5 403 aa30.89■■■□□ 2.54
ATPAF1-201ENST00000329231 ZNF668Q96K58 619 aaPredicted RBP30.89■■■□□ 2.54
ATPAF1-201ENST00000329231 RGS18Q9NS28 235 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms