RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 COL25A1Q9BXS0 654 aaPredicted RBP23.96■■□□□ 1.43
UBE2D3-201ENST00000321805 DGKIO75912 1065 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 VTNP04004 478 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 CLCN3P51790 818 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 ST3GAL1Q11201 340 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 NFX1Q12986 1120 aaKnown RBP23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 RTN4RL1Q86UN2 441 aaPredicted RBP23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 TMEM192Q8IY95 271 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 TMEM40Q8WWA1 233 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 TMX1Q9H3N1 280 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 PRDM6Q9NQX0 595 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 SH2B1Q9NRF2 756 aaPredicted RBP23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 C1orf112Q9NSG2 853 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 SEPT9Q9UHD8 586 aaPredicted RBP23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 AKT3Q9Y243 479 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 NOC2LQ9Y3T9 749 aaKnown RBP23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 PPME1Q9Y570 386 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 REV3LO60673 3130 aa23.95■■□□□ 1.42
UBE2D3-201ENST00000321805 RBM25P49756 843 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 MRPS5P82675 430 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 CDC42EP1Q00587 391 aa23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 KIZQ2M2Z5 673 aa23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 EARS2Q5JPH6 523 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 KRT40Q6A162 431 aa23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 DIS3L2Q8IYB7 885 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 CLP1Q92989 425 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 OSMRQ99650 979 aa23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 KIF2CQ99661 725 aa23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 CDHR5Q9HBB8 845 aa23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 COG5Q9UP83 839 aa23.94■■□□□ 1.42
UBE2D3-201ENST00000321805 C5orf67F2Z3F1 127 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 H3BNC9 293 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 MARCH6O60337 910 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 DTNBO60941 627 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 STBD1O95210 358 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 BAG4O95429 457 aaKnown RBP23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 RB1P06400 928 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 QARSP47897 775 aaKnown RBP23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 SARSP49591 514 aaKnown RBP23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 PTPROQ16827 1216 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 AAK1Q2M2I8 961 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 TMEM266Q2M3C6 531 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 POTEDQ86YR6 584 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 CMTR2Q8IYT2 770 aaKnown RBP23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 LRRC71Q8N4P6 559 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 HAS1Q92839 578 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 JPH2Q9BR39 696 aaPredicted RBP23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 ST3GAL5Q9UNP4 418 aa23.93■■□□□ 1.42
UBE2D3-201ENST00000321805 IGKV6-21A0A0C4DH24 114 aa23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 EML1O00423 815 aa23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 P4HBP07237 508 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 NLRP11P59045 1033 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 HMGN5P82970 282 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 BTG3Q14201 252 aaPredicted RBP23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 SAFBQ15424 915 aaKnown RBP eCLIP23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 SKIV2LQ15477 1246 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 FAM228AQ86W67 206 aa23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 BANK1Q8NDB2 785 aa23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 MRPL38Q96DV4 380 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 ASB2Q96Q27 587 aa23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 CEP89Q96ST8 783 aa23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 ADAMTS10Q9H324 1103 aa23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 RGS18Q9NS28 235 aa23.92■■□□□ 1.42
UBE2D3-201ENST00000321805 DENND3A2RUS2 1198 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 FAM205CA6NFA0 338 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 BTBD18B2RXH4 712 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 LINC00271P0C7V0 271 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 EIF4BP23588 611 aaKnown RBP23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 DNM2P50570 870 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 GPC3P51654 580 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 EPHA7Q15375 998 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 MTERF2Q49AM1 385 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 SLC24A5Q71RS6 500 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 CCDC83Q8IWF9 413 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 EXOC8Q8IYI6 725 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 C11orf84Q9BUA3 381 aaPredicted RBP23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 PLVAPQ9BX97 442 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 LRFN2Q9ULH4 789 aa23.91■■□□□ 1.42
UBE2D3-201ENST00000321805 TTC28Q96AY4 2481 aa23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 MAFO75444 373 aaPredicted RBP23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 CTNNB1P35222 781 aa23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 SPIRE1Q08AE8 756 aa23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 GPM6BQ13491 265 aa23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 TIGD5Q53EQ6 642 aa23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 ANO5Q75V66 913 aa23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 C4orf19Q8IY42 314 aa23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 PPP1R16BQ96T49 567 aa23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 ADAM2Q99965 735 aa23.9■■□□□ 1.42
UBE2D3-201ENST00000321805 DDX11L8A8MPP1 907 aa23.89■■□□□ 1.41
UBE2D3-201ENST00000321805 C9IYK1 514 aa23.89■■□□□ 1.41
UBE2D3-201ENST00000321805 MGEA5O60502 916 aa23.89■■□□□ 1.41
UBE2D3-201ENST00000321805 BMPR1AP36894 532 aa23.89■■□□□ 1.41
UBE2D3-201ENST00000321805 RABEP1Q15276 862 aa23.89■■□□□ 1.41
UBE2D3-201ENST00000321805 C8orf76Q96K31 380 aa23.89■■□□□ 1.41
UBE2D3-201ENST00000321805 LMAN2LQ9H0V9 348 aa23.89■■□□□ 1.41
UBE2D3-201ENST00000321805 ELAC1Q9H777 363 aaKnown RBP23.89■■□□□ 1.41
UBE2D3-201ENST00000321805 PCDHB7Q9Y5E2 793 aa23.89■■□□□ 1.41
UBE2D3-201ENST00000321805 SPTBN5Q9NRC6 3674 aaKnown RBP23.88■■□□□ 1.41
UBE2D3-201ENST00000321805 NEMFO60524 1076 aa23.88■■□□□ 1.41
UBE2D3-201ENST00000321805 DARSP14868 501 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms