RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 PLVAPQ9BX97 442 aa20.55■□□□□ 0.88
TMEM88-201ENST00000301599 LMAN2LQ9H0V9 348 aa20.55■□□□□ 0.88
TMEM88-201ENST00000301599 RGS18Q9NS28 235 aa20.55■□□□□ 0.88
TMEM88-201ENST00000301599 C1orf112Q9NSG2 853 aa20.55■□□□□ 0.88
TMEM88-201ENST00000301599 AKT3Q9Y243 479 aa20.55■□□□□ 0.88
TMEM88-201ENST00000301599 MYH9P35579 1960 aaKnown RBP20.54■□□□□ 0.88
TMEM88-201ENST00000301599 CTDNEP1O95476 244 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 LINC00271P0C7V0 271 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 CLCN3P51790 818 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 NEK4P51957 841 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 NLRP11P59045 1033 aaKnown RBP20.54■□□□□ 0.88
TMEM88-201ENST00000301599 UGCGQ16739 394 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 XKR3Q5GH77 459 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 PPP4R3AQ6IN85 833 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 B3GNT9Q6UX72 402 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 SLC24A5Q71RS6 500 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 NEK8Q86SG6 692 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 PPP1R16BQ96T49 567 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 OSMRQ99650 979 aa20.54■□□□□ 0.88
TMEM88-201ENST00000301599 NIFKQ9BYG3 293 aaKnown RBP20.54■□□□□ 0.88
TMEM88-201ENST00000301599 UBE2ZQ9H832 354 aaPredicted RBP20.54■□□□□ 0.88
TMEM88-201ENST00000301599 GCFC2P16383 781 aaKnown RBP20.53■□□□□ 0.88
TMEM88-201ENST00000301599 CDC42EP1Q00587 391 aa20.53■□□□□ 0.88
TMEM88-201ENST00000301599 TBC1D8BQ0IIM8 1120 aa20.53■□□□□ 0.88
TMEM88-201ENST00000301599 TARBP2Q15633 366 aaKnown RBP20.53■□□□□ 0.88
TMEM88-201ENST00000301599 ME3Q16798 604 aa20.53■□□□□ 0.88
TMEM88-201ENST00000301599 NAALADL2Q58DX5 795 aa20.53■□□□□ 0.88
TMEM88-201ENST00000301599 LRRC71Q8N4P6 559 aa20.53■□□□□ 0.88
TMEM88-201ENST00000301599 LINC01465Q8N7H1 131 aa20.53■□□□□ 0.88
TMEM88-201ENST00000301599 NECAB1Q8N987 351 aa20.53■□□□□ 0.88
TMEM88-201ENST00000301599 ADAMTS10Q9H324 1103 aa20.53■□□□□ 0.88
TMEM88-201ENST00000301599 COL4A4P53420 1690 aaPredicted RBP20.52■□□□□ 0.88
TMEM88-201ENST00000301599 DDX11L8A8MPP1 907 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 MARCH6O60337 910 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 MGEA5O60502 916 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 EIF4BP23588 611 aaKnown RBP20.52■□□□□ 0.88
TMEM88-201ENST00000301599 FAM189BP81408 668 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 PIK3AP1Q6ZUJ8 805 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 FAM228AQ86W67 206 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 OXER1Q8TDS5 423 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 P2RX5Q93086 422 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 NSUN3Q9H649 340 aaKnown RBP20.52■□□□□ 0.88
TMEM88-201ENST00000301599 GJB4Q9NTQ9 266 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 MRPL42Q9Y6G3 142 aaKnown RBP20.52■□□□□ 0.88
TMEM88-201ENST00000301599 EVPLQ92817 2033 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 REV3LO60673 3130 aa20.52■□□□□ 0.88
TMEM88-201ENST00000301599 C9IYK1 514 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 GRM6O15303 877 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 NCK2O43639 380 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 SLC37A4O43826 429 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 CCNT1O60563 726 aaKnown RBP20.51■□□□□ 0.87
TMEM88-201ENST00000301599 DTNBO60941 627 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 FDPSP14324 419 aaKnown RBP20.51■□□□□ 0.87
TMEM88-201ENST00000301599 ZSCAN20P17040 1043 aaPredicted RBP20.51■□□□□ 0.87
TMEM88-201ENST00000301599 IBSPP21815 317 aaPredicted RBP20.51■□□□□ 0.87
TMEM88-201ENST00000301599 DNM2P50570 870 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 PSMC5P62195 406 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 PAN2Q504Q3 1202 aaKnown RBP20.51■□□□□ 0.87
TMEM88-201ENST00000301599 TCEAL5Q5H9L2 206 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 GTF3C6Q969F1 213 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 NECAB3Q96P71 396 aaPredicted RBP20.51■□□□□ 0.87
TMEM88-201ENST00000301599 BRMS1Q9HCU9 246 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 KCNMB3Q9NPA1 279 aa20.51■□□□□ 0.87
TMEM88-201ENST00000301599 SEPT9Q9UHD8 586 aaPredicted RBP20.51■□□□□ 0.87
TMEM88-201ENST00000301599 SPTBN5Q9NRC6 3674 aaKnown RBP20.51■□□□□ 0.87
TMEM88-201ENST00000301599 TBX3O15119 743 aa20.5■□□□□ 0.87
TMEM88-201ENST00000301599 DKC1O60832 514 aaKnown RBP eCLIP20.5■□□□□ 0.87
TMEM88-201ENST00000301599 STBD1O95210 358 aa20.5■□□□□ 0.87
TMEM88-201ENST00000301599 PPP2R5CQ13362 524 aa20.5■□□□□ 0.87
TMEM88-201ENST00000301599 DSC3Q14574 896 aa20.5■□□□□ 0.87
TMEM88-201ENST00000301599 LEXMQ3ZCV2 418 aa20.5■□□□□ 0.87
TMEM88-201ENST00000301599 MTERF2Q49AM1 385 aa20.5■□□□□ 0.87
TMEM88-201ENST00000301599 ELAC1Q9H777 363 aaKnown RBP20.5■□□□□ 0.87
TMEM88-201ENST00000301599 ATP6V0A4Q9HBG4 840 aa20.5■□□□□ 0.87
TMEM88-201ENST00000301599 PLAGL2Q9UPG8 496 aa20.5■□□□□ 0.87
TMEM88-201ENST00000301599 LOXHD1Q8IVV2 1947 aa20.49■□□□□ 0.87
TMEM88-201ENST00000301599 BAG4O95429 457 aaKnown RBP20.49■□□□□ 0.87
TMEM88-201ENST00000301599 SEC24BO95487 1268 aa20.49■□□□□ 0.87
TMEM88-201ENST00000301599 KCNA5P22460 613 aa20.49■□□□□ 0.87
TMEM88-201ENST00000301599 KRT2P35908 639 aa20.49■□□□□ 0.87
TMEM88-201ENST00000301599 QARSP47897 775 aaKnown RBP20.49■□□□□ 0.87
TMEM88-201ENST00000301599 GPC3P51654 580 aa20.49■□□□□ 0.87
TMEM88-201ENST00000301599 PABPC5Q96DU9 382 aaKnown RBP20.49■□□□□ 0.87
TMEM88-201ENST00000301599 SCLT1Q96NL6 688 aa20.49■□□□□ 0.87
TMEM88-201ENST00000301599 ALG13Q9NP73 1137 aaKnown RBP20.49■□□□□ 0.87
TMEM88-201ENST00000301599 TMEM161AQ9NX61 479 aa20.49■□□□□ 0.87
TMEM88-201ENST00000301599 TCF20Q9UGU0 1960 aaKnown RBP20.48■□□□□ 0.87
TMEM88-201ENST00000301599 IGKV6-21A0A0C4DH24 114 aa20.48■□□□□ 0.87
TMEM88-201ENST00000301599 EML1O00423 815 aa20.48■□□□□ 0.87
TMEM88-201ENST00000301599 MAFO75444 373 aaPredicted RBP20.48■□□□□ 0.87
TMEM88-201ENST00000301599 P4HBP07237 508 aaKnown RBP20.48■□□□□ 0.87
TMEM88-201ENST00000301599 DARSP14868 501 aaKnown RBP20.48■□□□□ 0.87
TMEM88-201ENST00000301599 GATMP50440 423 aa20.48■□□□□ 0.87
TMEM88-201ENST00000301599 PUS10Q3MIT2 529 aaKnown RBP20.48■□□□□ 0.87
TMEM88-201ENST00000301599 FAM102BQ5T8I3 360 aa20.48■□□□□ 0.87
TMEM88-201ENST00000301599 NLRP7Q8WX94 980 aa20.48■□□□□ 0.87
TMEM88-201ENST00000301599 CEP89Q96ST8 783 aa20.48■□□□□ 0.87
TMEM88-201ENST00000301599 JPH2Q9BR39 696 aaPredicted RBP20.48■□□□□ 0.87
TMEM88-201ENST00000301599 AAASQ9NRG9 546 aa20.48■□□□□ 0.87
TMEM88-201ENST00000301599 VAV3Q9UKW4 847 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms