RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ZDHHC18Q9NUE0 388 aa16.24■□□□□ 0.19
XRCC1-201ENST00000262887 SNX3O60493 162 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 NTSR2O95665 410 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 AGTP01019 485 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 PDE6CP51160 858 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 PDIA5Q14554 519 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 VPS36Q86VN1 386 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 RNF25Q96BH1 459 aaPredicted RBP16.23■□□□□ 0.19
XRCC1-201ENST00000262887 HES6Q96HZ4 224 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 GGT7Q9UJ14 662 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 AMFRQ9UKV5 643 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 NIP7Q9Y221 180 aaKnown RBP eCLIP16.23■□□□□ 0.19
XRCC1-201ENST00000262887 NR2E1Q9Y466 385 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 ECM1Q16610 540 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 C6orf118Q5T5N4 469 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 DUPD1Q68J44 220 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 COL23A1Q86Y22 540 aaPredicted RBP16.23■□□□□ 0.19
XRCC1-201ENST00000262887 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 KLHL29Q96CT2 875 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 HDAC9Q9UKV0 1011 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 DAAM1Q9Y4D1 1078 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 ENO4A6NNW6 628 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 CETN3O15182 167 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 PLTPP55058 493 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 PTENP60484 403 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 COPS2P61201 443 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 BLMHQ13867 455 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 GALNTL6Q49A17 601 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 ADAT2Q7Z6V5 191 aaKnown RBP16.23■□□□□ 0.19
XRCC1-201ENST00000262887 ERICH1Q86X53 443 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 ERP44Q9BS26 406 aa16.23■□□□□ 0.19
XRCC1-201ENST00000262887 USP15Q9Y4E8 981 aaPredicted RBP16.23■□□□□ 0.19
XRCC1-201ENST00000262887 A0A0A6YYK5 440 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 PECAM1P16284 738 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 NT5C2P49902 561 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 CCDC65Q8IXS2 484 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 GBP7Q8N8V2 638 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 SLC44A5Q8NCS7 719 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 RBM46Q8TBY0 533 aaKnown RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 ZBTB10Q96DT7 871 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 PIGSQ96S52 555 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 MOV10L1Q9BXT6 1211 aaKnown RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 TTC7AQ9ULT0 858 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 SCN7AQ01118 1682 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 A8MUI8 341 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 LUC7L3O95232 432 aaKnown RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 OAS1P00973 400 aaKnown RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 KRT16P08779 473 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 COPB2P35606 906 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 PRKCIP41743 596 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 KLRC3Q07444 240 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 SLC29A2Q14542 456 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 HERC4Q5GLZ8 1057 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-201ENST00000262887 USP17L2Q6R6M4 530 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 CROCCP2Q86T23 111 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 SCFD1Q8WVM8 642 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 IFT74Q96LB3 600 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 CCDC113Q9H0I3 377 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 KCTD10Q9H3F6 313 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 STK38LQ9Y2H1 464 aa16.22■□□□□ 0.19
XRCC1-201ENST00000262887 BCL9O00512 1426 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 ATP2A2P16615 1042 aaKnown RBP16.21■□□□□ 0.19
XRCC1-201ENST00000262887 NR2F2P24468 414 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 KLRK1P26718 216 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 RPS6KA3P51812 740 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 BNIP1Q12981 228 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 PPP2R5EQ16537 467 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 EXOC3L4Q17RC7 722 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 ANKRD20A2Q5SQ80 823 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 ANKRD20A1Q5TYW2 823 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 ANKRD20A3Q5VUR7 823 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 STMN4Q9H169 189 aaPredicted RBP16.21■□□□□ 0.19
XRCC1-201ENST00000262887 EMILIN3Q9NT22 766 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 MINPP1Q9UNW1 487 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 MSH2P43246 934 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 NPEPPSP55786 919 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 LACTBP83111 547 aaPredicted RBP16.21■□□□□ 0.19
XRCC1-201ENST00000262887 CNGA2Q16280 664 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 DZIP1Q86YF9 867 aaKnown RBP16.21■□□□□ 0.19
XRCC1-201ENST00000262887 KIF2BQ8N4N8 673 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 FBXO25Q8TCJ0 367 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 U2AF1L4Q8WU68 220 aaKnown RBP16.21■□□□□ 0.19
XRCC1-201ENST00000262887 GLG1Q92896 1179 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 ARHGEF3Q9NR81 526 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.21■□□□□ 0.19
XRCC1-201ENST00000262887 JAG2Q9Y219 1238 aa16.21■□□□□ 0.19
XRCC1-201ENST00000262887 ATP8B3O60423 1300 aa16.2■□□□□ 0.18
XRCC1-201ENST00000262887 SUN1O94901 812 aa16.2■□□□□ 0.18
XRCC1-201ENST00000262887 ATP11AP98196 1134 aa16.2■□□□□ 0.18
XRCC1-201ENST00000262887 FBXO33Q7Z6M2 555 aa16.2■□□□□ 0.18
XRCC1-201ENST00000262887 SPDYE1Q8NFV5 336 aaPredicted RBP16.2■□□□□ 0.18
XRCC1-201ENST00000262887 YIPF3Q9GZM5 350 aa16.2■□□□□ 0.18
XRCC1-201ENST00000262887 OSGEPQ9NPF4 335 aa16.2■□□□□ 0.18
XRCC1-201ENST00000262887 ARMCX3Q9UH62 379 aaPredicted RBP16.2■□□□□ 0.18
XRCC1-201ENST00000262887 CNOT7Q9UIV1 285 aaKnown RBP16.2■□□□□ 0.18
XRCC1-201ENST00000262887 SNX24Q9Y343 169 aa16.2■□□□□ 0.18
XRCC1-201ENST00000262887 KIF13BQ9NQT8 1826 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms