RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 AP1B1Q10567 949 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 LVRNQ6Q4G3 990 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 GAS2L3Q86XJ1 694 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 AHI1Q8N157 1196 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 GID8Q9NWU2 228 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 ABCC11Q96J66 1382 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 ACSL3O95573 720 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 SERPINB4P48594 390 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 CNGA3Q16281 694 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 INPP5DQ92835 1189 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 LRRC37BQ96QE4 947 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 DCTN4Q9UJW0 460 aa11.86□□□□□ -0.51
MSH6-201ENST00000234420 PRRG1O14668 218 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 HNRNPDLO14979 420 aaKnown RBP11.85□□□□□ -0.51
MSH6-201ENST00000234420 DPYDQ12882 1025 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 EIF4A2Q14240 407 aaKnown RBP11.85□□□□□ -0.51
MSH6-201ENST00000234420 CDH24Q86UP0 819 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.85□□□□□ -0.51
MSH6-201ENST00000234420 MMP19Q99542 508 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 ATP6V0A4Q9HBG4 840 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 HOXA13P31271 388 aaPredicted RBP11.85□□□□□ -0.51
MSH6-201ENST00000234420 ZAP70P43403 619 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 KIF23Q02241 960 aaPredicted RBP11.85□□□□□ -0.51
MSH6-201ENST00000234420 CCDC142Q17RM4 750 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 ZMYND12Q9H0C1 365 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 PLAAQ9Y263 795 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 PHLPP2Q6ZVD8 1323 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 FANCAO15360 1455 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 TTI1O43156 1089 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 DLGAP3O95886 979 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 SDE2Q6IQ49 451 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 KMT5AQ9NQR1 393 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 PIM2Q9P1W9 311 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 TRIM16LQ309B1 348 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 KRT26Q7Z3Y9 468 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 RNF135Q8IUD6 432 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 OPTNQ96CV9 577 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 BATF3Q9NR55 127 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
MSH6-201ENST00000234420 RBBP7Q16576 425 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 ZNF827Q17R98 1081 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 PDZD4Q76G19 769 aaPredicted RBP11.85□□□□□ -0.51
MSH6-201ENST00000234420 HORMAD1Q86X24 394 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 OSBPL9Q96SU4 736 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 FMO2Q99518 471 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 NDFIP2Q9NV92 336 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 NFU1Q9UMS0 254 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 LRRN2O75325 713 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 TSPAN9O75954 239 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 WEE1P30291 646 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 ZHX2Q9Y6X8 837 aa11.85□□□□□ -0.51
MSH6-201ENST00000234420 P4HA2O15460 535 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 ZNF189O75820 626 aaPredicted RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 DRP2Q13474 957 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 IMPG1Q17R60 797 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 ST13P5Q8NFI4 369 aaPredicted RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 RMI1Q9H9A7 625 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 ARIH2O95376 493 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 GSPT1P15170 499 aaKnown RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 NSFP46459 744 aaKnown RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 RFX3P48380 749 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 LUZP2Q86TE4 346 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 REXO1Q8N1G1 1221 aaKnown RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 WRNIP1Q96S55 665 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 KLHL31Q9H511 634 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 TRIM39Q9HCM9 518 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 YTHDC2Q9H6S0 1430 aaKnown RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 XPOTO43592 962 aaKnown RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 CASP14P31944 242 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 CIITAP33076 1130 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 GGCXP38435 758 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 CTSWP56202 376 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 TMPRSS15P98073 1019 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 SGO2Q562F6 1265 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 BTN2A1Q7KYR7 527 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 ANKRD44Q8N8A2 993 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 ABCC1P33527 1531 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 DEXIO95424 95 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 KCNA6P17658 529 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 SCP2P22307 547 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 PDXDC2PQ6P474 469 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 NANOGNBQ7Z5D8 188 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 DIS3L2Q8IYB7 885 aaKnown RBP11.84□□□□□ -0.51
MSH6-201ENST00000234420 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 FLAD1Q8NFF5 587 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 ASIC4Q96FT7 647 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 PCP4L1A6NKN8 68 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 H2AFZP0C0S5 128 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 SRGAP2BP0DMP2 458 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 GRIK1P39086 918 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 ZNF790Q6PG37 636 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 H2AFVQ71UI9 128 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 PLEKHM2Q8IWE5 1019 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 ZWILCHQ9H900 591 aa11.84□□□□□ -0.51
MSH6-201ENST00000234420 ADD3Q9UEY8 706 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms