RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 ARHGAP39Q9C0H5 1083 aa24.98■■□□□ 1.59
CDX1-201ENST00000231656 TBC1D7Q9P0N9 293 aa24.98■■□□□ 1.59
CDX1-201ENST00000231656 PPP2R2CQ9Y2T4 447 aa24.98■■□□□ 1.59
CDX1-201ENST00000231656 THSD7BQ9C0I4 1608 aa24.97■■□□□ 1.59
CDX1-201ENST00000231656 RIOK3O14730 519 aaKnown RBP24.97■■□□□ 1.59
CDX1-201ENST00000231656 GTF2F1P35269 517 aaKnown RBP eCLIP24.97■■□□□ 1.59
CDX1-201ENST00000231656 RGS2P41220 211 aa24.97■■□□□ 1.59
CDX1-201ENST00000231656 QARSP47897 775 aaKnown RBP24.97■■□□□ 1.59
CDX1-201ENST00000231656 TOGARAM2Q6ZUX3 1019 aa24.97■■□□□ 1.59
CDX1-201ENST00000231656 PIGOQ8TEQ8 1089 aa24.97■■□□□ 1.59
CDX1-201ENST00000231656 BHMT2Q9H2M3 363 aa24.97■■□□□ 1.59
CDX1-201ENST00000231656 ZSWIM4Q9H7M6 989 aa24.97■■□□□ 1.59
CDX1-201ENST00000231656 NKRFO15226 690 aaKnown RBP eCLIP24.96■■□□□ 1.59
CDX1-201ENST00000231656 ZSCAN12O43309 604 aa24.96■■□□□ 1.59
CDX1-201ENST00000231656 GGPS1O95749 300 aa24.96■■□□□ 1.59
CDX1-201ENST00000231656 CYP2B6P20813 491 aa24.96■■□□□ 1.59
CDX1-201ENST00000231656 TTLL4Q14679 1199 aa24.96■■□□□ 1.59
CDX1-201ENST00000231656 ABHD15Q6UXT9 468 aa24.96■■□□□ 1.59
CDX1-201ENST00000231656 SCFD1Q8WVM8 642 aa24.96■■□□□ 1.59
CDX1-201ENST00000231656 NACC1Q96RE7 527 aa24.96■■□□□ 1.59
CDX1-201ENST00000231656 RUSC1Q9BVN2 902 aa24.96■■□□□ 1.59
CDX1-201ENST00000231656 MYH9P35579 1960 aaKnown RBP24.96■■□□□ 1.59
CDX1-201ENST00000231656 ZBTB39O15060 712 aa24.95■■□□□ 1.59
CDX1-201ENST00000231656 TXNP10599 105 aaKnown RBP24.95■■□□□ 1.59
CDX1-201ENST00000231656 UGCGQ16739 394 aa24.95■■□□□ 1.59
CDX1-201ENST00000231656 METTL7BQ6UX53 244 aa24.95■■□□□ 1.59
CDX1-201ENST00000231656 NOC4LQ9BVI4 516 aaKnown RBP24.95■■□□□ 1.59
CDX1-201ENST00000231656 ABHD16BQ9H3Z7 469 aa24.95■■□□□ 1.59
CDX1-201ENST00000231656 ABHD10Q9NUJ1 306 aa24.95■■□□□ 1.59
CDX1-201ENST00000231656 FLRT1Q9NZU1 646 aa24.95■■□□□ 1.59
CDX1-201ENST00000231656 RBM47A0AV96 593 aaKnown RBP24.95■■□□□ 1.58
CDX1-201ENST00000231656 SOWAHDA6NJG2 315 aa24.95■■□□□ 1.58
CDX1-201ENST00000231656 PES1O00541 588 aaKnown RBP24.95■■□□□ 1.58
CDX1-201ENST00000231656 ATG7O95352 703 aa24.95■■□□□ 1.58
CDX1-201ENST00000231656 PSAPP07602 524 aa24.95■■□□□ 1.58
CDX1-201ENST00000231656 PSMC5P62195 406 aa24.95■■□□□ 1.58
CDX1-201ENST00000231656 SP3Q02447 781 aa24.95■■□□□ 1.58
CDX1-201ENST00000231656 MTF1Q14872 753 aa24.95■■□□□ 1.58
CDX1-201ENST00000231656 CELF3Q5SZQ8 465 aaKnown RBP24.95■■□□□ 1.58
CDX1-201ENST00000231656 TMEM63BQ5T3F8 832 aa24.95■■□□□ 1.58
CDX1-201ENST00000231656 APBA2Q99767 749 aa24.95■■□□□ 1.58
CDX1-201ENST00000231656 MLXIPQ9HAP2 919 aa24.95■■□□□ 1.58
CDX1-201ENST00000231656 CCL14Q16627 93 aa24.94■■□□□ 1.58
CDX1-201ENST00000231656 MIS18BP1Q6P0N0 1132 aa24.94■■□□□ 1.58
CDX1-201ENST00000231656 RAD9BQ6WBX8 426 aa24.94■■□□□ 1.58
CDX1-201ENST00000231656 ZNF592Q92610 1267 aa24.94■■□□□ 1.58
CDX1-201ENST00000231656 KCTD10Q9H3F6 313 aa24.94■■□□□ 1.58
CDX1-201ENST00000231656 KIF20AO95235 890 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 LYPLA2O95372 231 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 TUBB4AP04350 444 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 SUPT20HL2P0C7V6 817 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 TBC1D8BQ0IIM8 1120 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 ACVR2BQ13705 512 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 RINT1Q6NUQ1 792 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 SWSAP1Q6NVH7 229 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 EPM2AIP1Q7L775 607 aaPredicted RBP24.93■■□□□ 1.58
CDX1-201ENST00000231656 C4orf19Q8IY42 314 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 ERGIC2Q96RQ1 377 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 ZHX3Q9H4I2 956 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 GABBR1Q9UBS5 961 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 TTC26A0AVF1 554 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 KRT9P35527 623 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 FKBP3Q00688 224 aaKnown RBP24.93■■□□□ 1.58
CDX1-201ENST00000231656 MAN2A1Q16706 1144 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 VWA3BQ502W6 1294 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 OLFML2BQ68BL8 750 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 SFR1Q86XK3 245 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 CCDC60Q8IWA6 550 aaPredicted RBP24.93■■□□□ 1.58
CDX1-201ENST00000231656 ZC3H3Q8IXZ2 948 aaKnown RBP24.93■■□□□ 1.58
CDX1-201ENST00000231656 DHX37Q8IY37 1157 aaKnown RBP24.93■■□□□ 1.58
CDX1-201ENST00000231656 COPS5Q92905 334 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 TTYH3Q9C0H2 523 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 CAPN11Q9UMQ6 739 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 CENPFP49454 3210 aa24.93■■□□□ 1.58
CDX1-201ENST00000231656 DYNC1I1O14576 645 aa24.92■■□□□ 1.58
CDX1-201ENST00000231656 ADCYAP1R1P41586 468 aa24.92■■□□□ 1.58
CDX1-201ENST00000231656 CASP5P51878 434 aa24.92■■□□□ 1.58
CDX1-201ENST00000231656 CAP1Q01518 475 aa24.92■■□□□ 1.58
CDX1-201ENST00000231656 SYCP1Q15431 976 aa24.92■■□□□ 1.58
CDX1-201ENST00000231656 GSTTP1A0A1W2PQM5 241 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 GOLGA6L9A6NEM1 432 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 RSPH10B2B2RC85 870 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 RSPH10BP0C881 870 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 KIF22Q14807 665 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 TRIM65Q6PJ69 517 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 C1orf186Q6ZWK4 172 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 TMTC1Q8IUR5 882 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 NELFCDQ8IXH7 590 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 KIF18AQ8NI77 898 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 ATP6V0A1Q93050 837 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 CEP63Q96MT8 703 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 DESI2Q9BSY9 194 aa24.91■■□□□ 1.58
CDX1-201ENST00000231656 IGKV6D-21A0A0A0MT36 114 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 IGHA2P01877 340 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 YWHABP31946 246 aaKnown RBP24.9■■□□□ 1.58
CDX1-201ENST00000231656 HSDL1Q3SXM5 330 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 FKBP15Q5T1M5 1219 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 RETREG2Q8NC44 543 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 SEPT1Q8WYJ6 367 aa24.9■■□□□ 1.58
CDX1-201ENST00000231656 DNAJC7Q99615 494 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms