RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ddx20Q9JJY4 825 aaKnown RBP17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 EmcnQ9R0H2 261 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Olfr247E9PVJ7 320 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Olfr819K7N727 320 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Fam207aP58468 219 aaKnown RBP17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Dnm1lQ8K1M6 742 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Usp33Q8R5K2 909 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Myoz2Q9JJW5 264 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Kcnq4Q9JK97 696 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Usp14Q9JMA1 493 aaKnown RBP17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 DgkkE9Q7N4 1118 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Col9a2Q07643 688 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Ms4a5Q810P8 197 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Cyp26b1Q811W2 512 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Q8BGN9 141 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 E330017A01RikQ8BU47 192 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Mrgprx1Q8CIP3 322 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 HgsQ99LI8 775 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Slc5a5Q99PN0 618 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Ppp1r3gQ9CW07 347 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Exoc4O35382 975 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 D1Pas1P16381 660 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Wdhd1P59328 1117 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Tax1bp1Q3UKC1 814 aaKnown RBP17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Scaf8Q6DID3 1268 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Kat5Q8CHK4 513 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Gpsm2Q8VDU0 679 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Senp2Q91ZX6 588 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 SarnpQ9D1J3 210 aaKnown RBP17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Gimap9G3X987 291 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Idh1O88844 414 aaKnown RBP17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 HarsQ61035 509 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Krt15Q61414 452 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Tm4sf1Q64302 202 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Ptrh1Q8BW00 204 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Ccdc87Q8CDL9 855 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Snx24Q9CRB0 169 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 Eif2ak1Q9Z2R9 619 aa17.59■□□□□ 0.41
Trim28-201ENSMUST00000005705 A0A286YCQ6 122 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Pgrmc1O55022 195 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Scp2P32020 547 aaKnown RBP17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Uhmk1P97343 419 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Flt3Q00342 1000 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Tfcp2l1Q3UNW5 479 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 TbataQ7TSD4 393 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Fgd5Q80UZ0 1219 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Fam228aQ8CDW1 299 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Lrrc45Q8CIM1 670 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Dqx1Q924H9 718 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Cabp5Q9JLK3 173 aa17.58■□□□□ 0.41
Trim28-201ENSMUST00000005705 Krt36B1AQ75 473 aa17.58■□□□□ 0.4
Trim28-201ENSMUST00000005705 Elf1Q60775 612 aa17.58■□□□□ 0.4
Trim28-201ENSMUST00000005705 CrkQ64010 304 aa17.58■□□□□ 0.4
Trim28-201ENSMUST00000005705 Ehbp1Q69ZW3 1231 aa17.58■□□□□ 0.4
Trim28-201ENSMUST00000005705 Sh3d21Q7TSG5 549 aa17.58■□□□□ 0.4
Trim28-201ENSMUST00000005705 Lca5Q80ST9 704 aa17.58■□□□□ 0.4
Trim28-201ENSMUST00000005705 Cacna2d3Q9Z1L5 1091 aa17.58■□□□□ 0.4
Trim28-201ENSMUST00000005705 Gm5114W4VSN8 858 aa17.58■□□□□ 0.4
Trim28-201ENSMUST00000005705 R3hdm1E9Q9Q2 1135 aaKnown RBP17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 IvlP48997 467 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Lrrn4P59383 733 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Pim2Q62070 370 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Cplx3Q8R1B5 158 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Trex1Q91XB0 314 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Cep83Q9D5R3 692 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Znf287Q9EQB9 759 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Heatr4E9Q357 955 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Gm5622Q810Q0 167 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Thoc1Q8R3N6 657 aaKnown RBP17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Il13ra2O88786 383 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Csf1rP09581 977 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Ttf2Q5NC05 1138 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Ccdc189Q6NZQ0 333 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Adat2Q6P6J0 191 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 OtoaQ8K561 1137 aa17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Rbm6S4R1W5 1118 aaKnown RBP17.57■□□□□ 0.4
Trim28-201ENSMUST00000005705 Gcnt1Q09324 428 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Agbl1Q09M05 972 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Zfp957Q3UT76 567 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Myo6Q64331 1265 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Fbxo11Q7TPD1 930 aaKnown RBP17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 P2ry10Q8BFU7 328 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Dcaf8Q8N7N5 591 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Ftsj3Q9DBE9 838 aaKnown RBP17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Phtf1Q9QZ09 761 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Fxr2Q9WVR4 673 aaKnown RBP17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Fam171a1A2ATK9 892 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Usp4P35123 962 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Dlg4Q62108 724 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Ppp2r2aQ6P1F6 447 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Krt9Q6RHW0 743 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Btbd7Q8CFE5 1130 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Nmrk1Q91W63 195 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 RpainQ9CWY9 219 aa17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Chordc1Q9D1P4 331 aaKnown RBP17.56■□□□□ 0.4
Trim28-201ENSMUST00000005705 Usp17lbE9Q9U0 468 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Meis2P97367 477 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Klra9Q2TJJ8 266 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Xxylt1Q3U4G3 392 aa17.55■□□□□ 0.4
Trim28-201ENSMUST00000005705 Rhox12Q4TU81 186 aa17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 201.9 ms