RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 OTUD6BQ8N6M0 293 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 RABGAP1Q9Y3P9 1069 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 CAPN7Q9Y6W3 813 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 DDX60LQ5H9U9 1706 aaKnown RBP15.93■□□□□ 0.14
SCARB2-221ENST00000640341 TNRC6CQ9HCJ0 1690 aaKnown RBP15.93■□□□□ 0.14
SCARB2-221ENST00000640341 EML1O00423 815 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 HOXD13P35453 343 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 FBXO11Q86XK2 927 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 TMX4Q9H1E5 349 aaPredicted RBP15.93■□□□□ 0.14
SCARB2-221ENST00000640341 NEUROG2Q9H2A3 272 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 TAF1DQ9H5J8 278 aaPredicted RBP15.93■□□□□ 0.14
SCARB2-221ENST00000640341 KCNMB3Q9NPA1 279 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 RNF14Q9UBS8 474 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 NAV1Q8NEY1 1877 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 IGKV6D-41A0A0C4DH26 115 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 SPATA31C1P0DKV0 1188 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 CCDC174Q6PII3 467 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 SYN2Q92777 582 aaPredicted RBP15.92■□□□□ 0.14
SCARB2-221ENST00000640341 TRIM51Q9BSJ1 452 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 AMNQ9BXJ7 453 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 SWAP70Q9UH65 585 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 GCOM1H8Y6P7 765 aaPredicted RBP15.92■□□□□ 0.14
SCARB2-221ENST00000640341 PGRMC1O00264 195 aaKnown RBP15.92■□□□□ 0.14
SCARB2-221ENST00000640341 FGGP02679 453 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 MYZAPP0CAP1 466 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 MEX3CQ5U5Q3 659 aaKnown RBP15.92■□□□□ 0.14
SCARB2-221ENST00000640341 PPP1R18Q6NYC8 613 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 PIK3R5Q8WYR1 880 aa15.92■□□□□ 0.14
SCARB2-221ENST00000640341 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
SCARB2-221ENST00000640341 A0A087WUV0 522 aaPredicted RBP15.91■□□□□ 0.14
SCARB2-221ENST00000640341 TLDC2A0PJX2 215 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 HSD17B3P37058 310 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 CRKP46108 304 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 SLC20A2Q08357 652 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 IFFO1Q0D2I5 559 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 VPS72Q15906 364 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 APOBEC3HQ6NTF7 200 aaKnown RBP15.91■□□□□ 0.14
SCARB2-221ENST00000640341 DHX37Q8IY37 1157 aaKnown RBP15.91■□□□□ 0.14
SCARB2-221ENST00000640341 FBXL5Q9UKA1 691 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 MSH4O15457 936 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 USP11P51784 963 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 IFT88Q13099 833 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 CRY2Q49AN0 593 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 ATP6V1G3Q96LB4 118 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 EIF2AK1Q9BQI3 630 aaKnown RBP15.91■□□□□ 0.14
SCARB2-221ENST00000640341 ZBTB21Q9ULJ3 1066 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 ATP8A1Q9Y2Q0 1164 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 EVI5O60447 810 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 RPL13P26373 211 aaKnown RBP15.91■□□□□ 0.14
SCARB2-221ENST00000640341 STAT1P42224 750 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 GALCP54803 685 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 HDLBPQ00341 1268 aaKnown RBP15.91■□□□□ 0.14
SCARB2-221ENST00000640341 EDRF1Q3B7T1 1238 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 FAM186BQ8IYM0 893 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 TPCN2Q8NHX9 752 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 COA1Q9GZY4 146 aa15.91■□□□□ 0.14
SCARB2-221ENST00000640341 KRT13P13646 458 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 GTF2A1P52655 376 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-221ENST00000640341 C15orf52Q6ZUT6 534 aaKnown RBP15.9■□□□□ 0.14
SCARB2-221ENST00000640341 SYCP3Q8IZU3 236 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 SLC35C1Q96A29 364 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 PCIF1Q9H4Z3 704 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 NR2E1Q9Y466 385 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 DDX3XO00571 662 aaKnown RBP eCLIP15.9■□□□□ 0.143e-14■■■■■ 29.4
SCARB2-221ENST00000640341 GH2P01242 217 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 RPA1P27694 616 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 NOVP48745 357 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 IFI16Q16666 785 aaKnown RBP15.9■□□□□ 0.14
SCARB2-221ENST00000640341 SYT2Q8N9I0 419 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-221ENST00000640341 WHAMMQ8TF30 809 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 KAT2BQ92831 832 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 TMOD4Q9NZQ9 345 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 NOVA2Q9UNW9 492 aaKnown RBP15.9■□□□□ 0.14
SCARB2-221ENST00000640341 MYO1FO00160 1098 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 TOM1O60784 492 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 NDUFB10O96000 172 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 MNAT1P51948 309 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 DHX9Q08211 1270 aaKnown RBP15.9■□□□□ 0.14
SCARB2-221ENST00000640341 KRT71Q3SY84 523 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 FRMD5Q7Z6J6 570 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 ETNPPLQ8TBG4 499 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 DYDC2Q96IM9 177 aa15.9■□□□□ 0.14
SCARB2-221ENST00000640341 ASTN1O14525 1302 aa15.89■□□□□ 0.13
SCARB2-221ENST00000640341 PPP1R37O75864 691 aa15.89■□□□□ 0.13
SCARB2-221ENST00000640341 MSL1Q68DK7 614 aa15.89■□□□□ 0.13
SCARB2-221ENST00000640341 ZNF746Q6NUN9 644 aaPredicted RBP15.89■□□□□ 0.13
SCARB2-221ENST00000640341 AADACL2Q6P093 401 aa15.89■□□□□ 0.13
SCARB2-221ENST00000640341 PPP1R12BO60237 982 aaPredicted RBP15.89■□□□□ 0.13
SCARB2-221ENST00000640341 BUB1BO60566 1050 aaPredicted RBP15.89■□□□□ 0.13
SCARB2-221ENST00000640341 DRAP1Q14919 205 aaPredicted RBP15.89■□□□□ 0.13
SCARB2-221ENST00000640341 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
SCARB2-221ENST00000640341 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.13
SCARB2-221ENST00000640341 TYW1Q9NV66 732 aaKnown RBP15.89■□□□□ 0.13
SCARB2-221ENST00000640341 DNAJC12Q9UKB3 198 aa15.89■□□□□ 0.13
SCARB2-221ENST00000640341 DCDC2CA8MYV0 355 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 SPIRE1Q08AE8 756 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 EPHA7Q15375 998 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 HYIQ5T013 277 aa15.88■□□□□ 0.13
SCARB2-221ENST00000640341 CTNNBL1Q8WYA6 563 aaPredicted RBP15.88■□□□□ 0.13
SCARB2-221ENST00000640341 GLG1Q92896 1179 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms