RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 CAMTA2O94983 1202 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 POLR2BP30876 1174 aaKnown RBP17.97■□□□□ 0.47
SCARB2-210ENST00000638567 ADCY2Q08462 1091 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 ZNF746Q6NUN9 644 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-210ENST00000638567 HNRNPLLQ8WVV9 542 aaKnown RBP17.97■□□□□ 0.47
SCARB2-210ENST00000638567 STK32BQ9NY57 414 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 PEX3P56589 373 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 YWHAEP62258 255 aaKnown RBP17.97■□□□□ 0.47
SCARB2-210ENST00000638567 LMNB2Q03252 620 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 PDIA5Q14554 519 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 BEND6Q5SZJ8 279 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-210ENST00000638567 TBC1D1Q86TI0 1168 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-210ENST00000638567 FAM20AQ96MK3 541 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 GMNCA6NCL1 334 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 TRIM49P0CI25 452 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 TRIM49CP0CI26 452 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 GUCY2CP25092 1073 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 SF3B3Q15393 1217 aaKnown RBP17.97■□□□□ 0.47
SCARB2-210ENST00000638567 SLC18A3Q16572 532 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 PPP1R18Q6NYC8 613 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 RBM12Q9NTZ6 932 aaKnown RBP17.97■□□□□ 0.47
SCARB2-210ENST00000638567 FBXL5Q9UKA1 691 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 PXDNQ92626 1479 aa17.97■□□□□ 0.47
SCARB2-210ENST00000638567 PDS5AQ29RF7 1337 aaKnown RBP17.96■□□□□ 0.47
SCARB2-210ENST00000638567 SHPRHQ149N8 1683 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 SSU72P8A0A1W2PR75 194 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 MIF4GDA9UHW6 222 aaKnown RBP17.96■□□□□ 0.47
SCARB2-210ENST00000638567 YWHAGP61981 247 aaKnown RBP eCLIP17.96■□□□□ 0.47
SCARB2-210ENST00000638567 METTL13Q8N6R0 699 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 ARHGEF1Q92888 912 aaKnown RBP17.96■□□□□ 0.47
SCARB2-210ENST00000638567 TRIM11Q96F44 468 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 ITSN1Q15811 1721 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 NPHP3-ACAD11A0A0J9YXS1 232 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 STXBP3O00186 592 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 EIF2AK2P19525 551 aaKnown RBP17.96■□□□□ 0.47
SCARB2-210ENST00000638567 CNKSR1Q969H4 720 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.96■□□□□ 0.47
SCARB2-210ENST00000638567 PODXLO00592 558 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 STK10O94804 968 aaKnown RBP17.96■□□□□ 0.47
SCARB2-210ENST00000638567 TNFAIP1Q13829 316 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 BRDTQ58F21 947 aaPredicted RBP17.96■□□□□ 0.47
SCARB2-210ENST00000638567 NLRP14Q86W24 1093 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 ZBTB8OSQ8IWT0 167 aa17.96■□□□□ 0.47
SCARB2-210ENST00000638567 GOLGA8SH3BPF8 625 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 GCKP35557 465 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 KRT81Q14533 505 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 MIGA2Q7L4E1 593 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 IL17RAQ96F46 866 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 VCXQ9H320 206 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 SYNGAP1Q96PV0 1343 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 KRT14P02533 472 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 ZNF18P17022 549 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 PPP2R2AP63151 447 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 TRIM65Q6PJ69 517 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 DYDC2Q96IM9 177 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 SALL1Q9NSC2 1324 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 SART1O43290 800 aaKnown RBP17.95■□□□□ 0.46
SCARB2-210ENST00000638567 PLEKP08567 350 aaPredicted RBP17.95■□□□□ 0.46
SCARB2-210ENST00000638567 DCAF4Q8WV16 495 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 EXOC1LA0A1B0GW35 172 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 F5H6K3 240 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 TXNDC9O14530 226 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 NTSR2O95665 410 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 TNNC2P02585 160 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 SNX16P57768 344 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 DYNLT1P63172 113 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 KLRC3Q07444 240 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 ANAPC4Q9UJX5 808 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 DUSP10Q9Y6W6 482 aa17.95■□□□□ 0.46
SCARB2-210ENST00000638567 PPP1R37O75864 691 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 ACTN1P12814 892 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 FBXL16Q8N461 479 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 SLC17A8Q8NDX2 589 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 TRIM6Q9C030 488 aaPredicted RBP17.94■□□□□ 0.46
SCARB2-210ENST00000638567 ANAPC7Q9UJX3 599 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 L1RE1Q9UN81 338 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 GPC5P78333 572 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 SPATA24Q86W54 205 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 ATP2A3Q93084 1043 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 MRPL47Q9HD33 250 aaKnown RBP17.94■□□□□ 0.46
SCARB2-210ENST00000638567 CNOT8Q9UFF9 292 aaKnown RBP17.94■□□□□ 0.46
SCARB2-210ENST00000638567 BAZ2BQ9UIF8 2168 aaKnown RBP17.94■□□□□ 0.46
SCARB2-210ENST00000638567 KRT1P04264 644 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 CRKP46108 304 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 XXYLT1Q8NBI6 393 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 BANK1Q8NDB2 785 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 SLC7A3Q8WY07 619 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 MLXIPLQ9NP71 852 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
SCARB2-210ENST00000638567 ARHGAP42A6NI28 874 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 H7C0C1 242 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 RASA1P20936 1047 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 ATP5OP48047 213 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 GPSM2P81274 684 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 PROCA1Q8NCQ7 364 aaPredicted RBP17.93■□□□□ 0.46
SCARB2-210ENST00000638567 EHD2Q9NZN4 543 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 LRRD1A4D1F6 860 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 FTLP02792 175 aaPredicted RBP17.93■□□□□ 0.46
SCARB2-210ENST00000638567 PEX19P40855 299 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 CARSP49589 748 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms