RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 CCDC197Q8NCU1 140 aa17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 AP1M1Q9BXS5 423 aa17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 KLHL8Q9P2G9 620 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 AFF4Q9UHB7 1163 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 KIAA0232Q92628 1395 aa17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 UBE3CQ15386 1083 aa17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 DHX36Q9H2U1 1008 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 E5RI56 91 aa17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 CCT5P48643 541 aa17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 LVRNQ6Q4G3 990 aa17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 SPATS2LQ9NUQ6 558 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-221ENST00000636012 KRT14P02533 472 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 CACNB3P54284 484 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 MAN2A1Q16706 1144 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 CCDC159P0C7I6 412 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 FKBP3Q00688 224 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 TSPY1Q01534 308 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 SRP68Q9UHB9 627 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 ZBTB1Q9Y2K1 713 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 GSPT1P15170 499 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 PTK2BQ14289 1009 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 CLCA2Q9UQC9 943 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 GCFC2P16383 781 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 NME3Q13232 169 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 RTKN2Q8IZC4 609 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 LCORLQ8N3X6 602 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 SCOCQ9UIL1 159 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 ORC4O43929 436 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 MXI1P50539 228 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 MTMR1Q13613 665 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 TCP11Q8WWU5 503 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 PPP1R13BQ96KQ4 1090 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 EMILIN3Q9NT22 766 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 ADD2P35612 726 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 NR5A1Q13285 461 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 BZW1Q7L1Q6 419 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 RHPN2Q8IUC4 686 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 ZHX2Q9Y6X8 837 aa17.11■□□□□ 0.33
CACNA1A-221ENST00000636012 CLDN3O15551 220 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 KITP10721 976 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 THNSL1Q8IYQ7 743 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 FLCNQ8NFG4 579 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 RNF26Q9BY78 433 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 GINM1Q9NU53 330 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 NUP153P49790 1475 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 HSPA6P17066 643 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 CDK8P49336 464 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 FARP1Q9Y4F1 1045 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 GOLGA8MH3BSY2 632 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 SSTR3P32745 418 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 NRBF2Q96F24 287 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 DNAJC7Q99615 494 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 ARAP3Q8WWN8 1544 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 PNMA6FA0A0J9YX94 578 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 SERPING1P05155 500 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 CCHCR1Q8TD31 782 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 NHEJ1Q9H9Q4 299 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 PPP6R2O75170 966 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 GH2P01242 217 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 TAC1P20366 129 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 IFNA8P32881 189 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 ZNF280CQ8ND82 737 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 STRIP2Q9ULQ0 834 aa17.1■□□□□ 0.33
CACNA1A-221ENST00000636012 A0A087WWV3 80 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 IQANK1A0A1B0GTG1 560 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 PRPF4O43172 522 aaKnown RBP eCLIP17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 RNF135Q8IUD6 432 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 TRIML2Q8N7C3 387 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 GSDMAQ96QA5 445 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 DNAJC6O75061 913 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 TJP3O95049 919 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 ACSL3O95573 720 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 CYP27A1Q02318 531 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 BBS9Q3SYG4 887 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 BCL2L12Q9HB09 334 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 THEGQ9P2T0 379 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 SLC10A5Q5PT55 438 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 SPATS2Q86XZ4 545 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 YAF2Q8IY57 180 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 RAVER2Q9HCJ3 691 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 PGRMC1O00264 195 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 FAM83BQ5T0W9 1011 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 WRNIP1Q96S55 665 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 MAP2K2P36507 400 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 FAM160B2Q86V87 743 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 RMDN3Q96TC7 470 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 CIAO1O76071 339 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 RBBP7Q16576 425 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 TAF1BQ53T94 588 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 SH3KBP1Q96B97 665 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 ZBTB18Q99592 522 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 ZSWIM5Q9P217 1185 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms