RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 SKAP1Q86WV1 359 aa21.58■■□□□ 1.05
SMN2-215ENST00000628696 RASEFQ8IZ41 740 aa21.58■■□□□ 1.05
SMN2-215ENST00000628696 ATP8B4Q8TF62 1192 aa21.58■■□□□ 1.05
SMN2-215ENST00000628696 POF1BQ8WVV4 589 aa21.58■■□□□ 1.05
SMN2-215ENST00000628696 CDHR5Q9HBB8 845 aa21.58■■□□□ 1.05
SMN2-215ENST00000628696 ZNF302Q9NR11 478 aa21.58■■□□□ 1.05
SMN2-215ENST00000628696 NOC2LQ9Y3T9 749 aaKnown RBP21.58■■□□□ 1.05
SMN2-215ENST00000628696 IGKV6D-21A0A0A0MT36 114 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 CDC27P30260 824 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 SARSP49591 514 aaKnown RBP21.57■■□□□ 1.04
SMN2-215ENST00000628696 CLK2P49760 499 aaKnown RBP21.57■■□□□ 1.04
SMN2-215ENST00000628696 FGD1P98174 961 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 ZNF484Q5JVG2 852 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 SWSAP1Q6NVH7 229 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 MIS18BP1Q6P0N0 1132 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 NIPA1Q7RTP0 329 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 TRMT1LQ7Z2T5 733 aaKnown RBP21.57■■□□□ 1.04
SMN2-215ENST00000628696 ADGRD2Q7Z7M1 963 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 RBM23Q86U06 439 aaKnown RBP21.57■■□□□ 1.04
SMN2-215ENST00000628696 CCDC60Q8IWA6 550 aaPredicted RBP21.57■■□□□ 1.04
SMN2-215ENST00000628696 CKAP2LQ8IYA6 745 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 KIAA0319LQ8IZA0 1049 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 PPP1R16BQ96T49 567 aa21.57■■□□□ 1.04
SMN2-215ENST00000628696 POP1Q99575 1024 aaKnown RBP21.57■■□□□ 1.04
SMN2-215ENST00000628696 FAM217BQ9NTX9 383 aaPredicted RBP21.57■■□□□ 1.04
SMN2-215ENST00000628696 DENND3A2RUS2 1198 aa21.56■■□□□ 1.04
SMN2-215ENST00000628696 FAM86B1E9PN63 330 aa21.56■■□□□ 1.04
SMN2-215ENST00000628696 FAM86B2P0C5J1 330 aa21.56■■□□□ 1.04
SMN2-215ENST00000628696 BMP2KLQ5H9B9 411 aa21.56■■□□□ 1.04
SMN2-215ENST00000628696 MICAL1Q8TDZ2 1067 aa21.56■■□□□ 1.04
SMN2-215ENST00000628696 ADAM2Q99965 735 aa21.56■■□□□ 1.04
SMN2-215ENST00000628696 ERVK-5Q9HDB9 667 aa21.56■■□□□ 1.04
SMN2-215ENST00000628696 FNDC1Q4ZHG4 1894 aaPredicted RBP21.56■■□□□ 1.04
SMN2-215ENST00000628696 PLXNA4Q9HCM2 1894 aa21.56■■□□□ 1.04
SMN2-215ENST00000628696 TBKBP1A7MCY6 615 aa21.55■■□□□ 1.04
SMN2-215ENST00000628696 IPO5O00410 1097 aaKnown RBP21.55■■□□□ 1.04
SMN2-215ENST00000628696 MGEA5O60502 916 aa21.55■■□□□ 1.04
SMN2-215ENST00000628696 ADD1P35611 737 aaKnown RBP21.55■■□□□ 1.04
SMN2-215ENST00000628696 NRIP1P48552 1158 aa21.55■■□□□ 1.04
SMN2-215ENST00000628696 ZNF577Q9BSK1 485 aa21.55■■□□□ 1.04
SMN2-215ENST00000628696 ST3GAL5Q9UNP4 418 aa21.55■■□□□ 1.04
SMN2-215ENST00000628696 PCDHB12Q9Y5F1 795 aa21.55■■□□□ 1.04
SMN2-215ENST00000628696 COL1A2P08123 1366 aa21.55■■□□□ 1.04
SMN2-215ENST00000628696 C5orf42Q9H799 3197 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 DHX15O43143 795 aaKnown RBP21.54■■□□□ 1.04
SMN2-215ENST00000628696 KRT32Q14532 448 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 PFKFB3Q16875 520 aaPredicted RBP21.54■■□□□ 1.04
SMN2-215ENST00000628696 TSGA10IPQ3SY00 556 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 ODR4Q5SWX8 454 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 METTL13Q8N6R0 699 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 EFHBQ8N7U6 833 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 TMEM40Q8WWA1 233 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 AAASQ9NRG9 546 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 TCEAL9Q9UHQ7 104 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 MUTYHQ9UIF7 546 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 PCDHGC5Q9Y5F6 944 aa21.54■■□□□ 1.04
SMN2-215ENST00000628696 IGLV3-22A0A075B6J6 115 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 GPR182O15218 404 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 ATP4AP20648 1035 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 METAP2P50579 478 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMN2-215ENST00000628696 KIZQ2M2Z5 673 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 FAM102BQ5T8I3 360 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 RNF135Q8IUD6 432 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 MSLNLQ96KJ4 702 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 OSMRQ99650 979 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 TLE6Q9H808 572 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 RGS18Q9NS28 235 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 C1orf112Q9NSG2 853 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 RNF216Q9NWF9 866 aaPredicted RBP21.53■■□□□ 1.04
SMN2-215ENST00000628696 CLEC1BQ9P126 229 aa21.53■■□□□ 1.04
SMN2-215ENST00000628696 ZBTB42B2RXF5 422 aa21.52■■□□□ 1.04
SMN2-215ENST00000628696 ADAMTS3O15072 1205 aa21.52■■□□□ 1.04
SMN2-215ENST00000628696 CYP3A4P08684 503 aa21.52■■□□□ 1.04
SMN2-215ENST00000628696 HMGB1P09429 215 aaKnown RBP21.52■■□□□ 1.04
SMN2-215ENST00000628696 CPA1P15085 419 aa21.52■■□□□ 1.04
SMN2-215ENST00000628696 CRYBB1P53674 252 aaPredicted RBP21.52■■□□□ 1.04
SMN2-215ENST00000628696 APOBRQ0VD83 1088 aa21.52■■□□□ 1.04
SMN2-215ENST00000628696 SLC24A5Q71RS6 500 aa21.52■■□□□ 1.04
SMN2-215ENST00000628696 BBXQ8WY36 941 aaPredicted RBP21.52■■□□□ 1.04
SMN2-215ENST00000628696 C6orf50Q9HD87 102 aa21.52■■□□□ 1.04
SMN2-215ENST00000628696 TBC1D22BQ9NU19 505 aa21.52■■□□□ 1.04
SMN2-215ENST00000628696 WDR81Q562E7 1941 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 CCDC196A0A1B0GTZ2 297 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 C9IYK1 514 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 PER2O15055 1255 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 VTNP04004 478 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 RCAN1P53805 252 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 ZNF746Q6NUN9 644 aaPredicted RBP21.51■■□□□ 1.03
SMN2-215ENST00000628696 ALYREFQ86V81 257 aaKnown RBP21.51■■□□□ 1.03
SMN2-215ENST00000628696 FAM228AQ86W67 206 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 THNSL1Q8IYQ7 743 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 ATP6V0A4Q9HBG4 840 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 TYW1Q9NV66 732 aaKnown RBP21.51■■□□□ 1.03
SMN2-215ENST00000628696 BARX2Q9UMQ3 279 aaPredicted RBP21.51■■□□□ 1.03
SMN2-215ENST00000628696 SAMM50Q9Y512 469 aa21.51■■□□□ 1.03
SMN2-215ENST00000628696 CDC45O75419 566 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 C22orf31O95567 290 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 EYA4O95677 639 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 PSAPP07602 524 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 PRR16Q569H4 304 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms