RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 GATMP50440 423 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 SLC26A2P50443 739 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 NFX1Q12986 1120 aaKnown RBP12.68□□□□□ -0.38
TARDBP-221ENST00000619555 PAN2Q504Q3 1202 aaKnown RBP12.68□□□□□ -0.38
TARDBP-221ENST00000619555 TMEM31Q5JXX7 168 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 MIS18BP1Q6P0N0 1132 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 PDXDC2PQ6P474 469 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 BLOC1S2Q6QNY1 142 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 RASGRP4Q8TDF6 673 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 PHKBQ93100 1093 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 ZMYND12Q9H0C1 365 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 LMAN2LQ9H0V9 348 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 C6orf50Q9HD87 102 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 C11orf16Q9NQ32 467 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 NOC2LQ9Y3T9 749 aaKnown RBP12.68□□□□□ -0.38
TARDBP-221ENST00000619555 ESYT2A0FGR8 921 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 ZBTB42B2RXF5 422 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 MGEA5O60502 916 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 STAG3L1P0CL83 205 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 DNAJB1P25685 340 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 SSTR3P32745 418 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-221ENST00000619555 GTF2F1P35269 517 aaKnown RBP eCLIP12.67□□□□□ -0.387e-26■■■□□ 18.2
TARDBP-221ENST00000619555 DLX2Q07687 328 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-221ENST00000619555 HYAL1Q12794 435 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 CAMK1Q14012 370 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 PUS10Q3MIT2 529 aaKnown RBP12.67□□□□□ -0.38
TARDBP-221ENST00000619555 C8orf34Q49A92 452 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 ZNF484Q5JVG2 852 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 TRMT1LQ7Z2T5 733 aaKnown RBP12.67□□□□□ -0.38
TARDBP-221ENST00000619555 CMTR2Q8IYT2 770 aaKnown RBP12.67□□□□□ -0.38
TARDBP-221ENST00000619555 REXO1Q8N1G1 1221 aaKnown RBP12.67□□□□□ -0.38
TARDBP-221ENST00000619555 TMEM40Q8WWA1 233 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 PPP1R16BQ96T49 567 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 ZNF577Q9BSK1 485 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 PLVAPQ9BX97 442 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 IGFLR1Q9H665 355 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 ERVK-5Q9HDB9 667 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 PLAGL2Q9UPG8 496 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 KIAA1671Q9BY89 1806 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 MUC6Q6W4X9 2439 aa12.67□□□□□ -0.38
TARDBP-221ENST00000619555 WDR81Q562E7 1941 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 RPS6KA5O75582 802 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 MMP1P03956 469 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 ITGB1P05556 798 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 CLUL1Q15846 466 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 NTRK3Q16288 839 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 CTC1Q2NKJ3 1217 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 PRR16Q569H4 304 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 CKAP2LQ8IYA6 745 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 SPPL3Q8TCT6 385 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 CCDC12Q8WUD4 166 aaPredicted RBP12.66□□□□□ -0.38
TARDBP-221ENST00000619555 TBC1D22BQ9NU19 505 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 LRFN2Q9ULH4 789 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 ST3GAL5Q9UNP4 418 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 MAFBQ9Y5Q3 323 aaPredicted RBP12.66□□□□□ -0.38
TARDBP-221ENST00000619555 C5orf42Q9H799 3197 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 COL1A2P08123 1366 aa12.66□□□□□ -0.38
TARDBP-221ENST00000619555 LINC01565O15544 149 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
TARDBP-221ENST00000619555 NCK2O43639 380 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 EDIL3O43854 480 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 GPR37L1O60883 481 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 C22orf31O95567 290 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 GNA11P29992 359 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 IRS1P35568 1242 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 SARSP49591 514 aaKnown RBP12.65□□□□□ -0.38
TARDBP-221ENST00000619555 CCT2P78371 535 aaKnown RBP12.65□□□□□ -0.38
TARDBP-221ENST00000619555 SETQ01105 290 aaPredicted RBP12.65□□□□□ -0.38
TARDBP-221ENST00000619555 AKAP17AQ02040 695 aaKnown RBP12.65□□□□□ -0.38
TARDBP-221ENST00000619555 ZNF746Q6NUN9 644 aaPredicted RBP12.65□□□□□ -0.38
TARDBP-221ENST00000619555 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 KLHL23Q8NBE8 558 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 P2RX5Q93086 422 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 ADAM2Q99965 735 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 SLC26A6Q9BXS9 759 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 AGXT2Q9BYV1 514 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 NCOA5Q9HCD5 579 aaKnown RBP12.65□□□□□ -0.38
TARDBP-221ENST00000619555 VPS54Q9P1Q0 977 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 GABBR1Q9UBS5 961 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 PCDHA10Q9Y5I2 948 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 NID2Q14112 1375 aa12.65□□□□□ -0.38
TARDBP-221ENST00000619555 FNDC1Q4ZHG4 1894 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-221ENST00000619555 VTNP04004 478 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 PSAPP07602 524 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 PDIA3P30101 505 aaKnown RBP12.64□□□□□ -0.39
TARDBP-221ENST00000619555 CIITAP33076 1130 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 ZP2Q05996 745 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 KIZQ2M2Z5 673 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 FAM102BQ5T8I3 360 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 MCTP2Q6DN12 878 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 ADGRD2Q7Z7M1 963 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 FAM228AQ86W67 206 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 METTL13Q8N6R0 699 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 POF1BQ8WVV4 589 aa12.64□□□□□ -0.39
TARDBP-221ENST00000619555 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-221ENST00000619555 LENG9Q96B70 501 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms