RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 PPP2R3BQ9Y5P8 575 aa17.28■□□□□ 0.36
NR1H3-235ENST00000616973 MYH10P35580 1976 aa17.28■□□□□ 0.36
NR1H3-235ENST00000616973 POLR2AP24928 1970 aaKnown RBP17.27■□□□□ 0.36
NR1H3-235ENST00000616973 C19orf81C9J6K1 198 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 PJA2O43164 708 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 AKR1B10O60218 316 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 XRCC5P13010 732 aaKnown RBP17.27■□□□□ 0.36
NR1H3-235ENST00000616973 NMT1P30419 496 aaKnown RBP17.27■□□□□ 0.36
NR1H3-235ENST00000616973 POLR2FP61218 127 aaKnown RBP17.27■□□□□ 0.36
NR1H3-235ENST00000616973 TEX35Q5T0J7 233 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 DPY19L2P1Q6NXN4 242 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 RNF207Q6ZRF8 634 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 FAM178BQ8IXR5 827 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 REPS2Q8NFH8 660 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 BORCS6Q96GS4 357 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 WRNIP1Q96S55 665 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 PDCD2LQ9BRP1 358 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 STRA6Q9BX79 667 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 NLRC4Q9NPP4 1024 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 PXMP2Q9NR77 195 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 HOMER2Q9NSB8 354 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 AIPL1Q9NZN9 384 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 TFR2Q9UP52 801 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.36
NR1H3-235ENST00000616973 SBF1O95248 1867 aa17.27■□□□□ 0.35
NR1H3-235ENST00000616973 MAPTP10636 758 aaKnown RBP17.27■□□□□ 0.35
NR1H3-235ENST00000616973 KCNA1Q09470 495 aa17.27■□□□□ 0.35
NR1H3-235ENST00000616973 MAPK7Q13164 816 aa17.27■□□□□ 0.35
NR1H3-235ENST00000616973 R3HDM1Q15032 1099 aaKnown RBP17.27■□□□□ 0.35
NR1H3-235ENST00000616973 ANGEL2Q5VTE6 544 aaKnown RBP17.27■□□□□ 0.35
NR1H3-235ENST00000616973 ATG4CQ96DT6 458 aa17.27■□□□□ 0.35
NR1H3-235ENST00000616973 MAF1Q9H063 256 aa17.27■□□□□ 0.35
NR1H3-235ENST00000616973 FBXL5Q9UKA1 691 aa17.27■□□□□ 0.35
NR1H3-235ENST00000616973 GTPBP10A4D1E9 387 aaKnown RBP17.26■□□□□ 0.35
NR1H3-235ENST00000616973 POTEB2H3BUK9 544 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 DDX39AO00148 427 aaKnown RBP17.26■□□□□ 0.35
NR1H3-235ENST00000616973 TLR2O60603 784 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 PPP1R37O75864 691 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 PADI6Q6TGC4 694 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 GOLGA5Q8TBA6 731 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 SECISBP2LQ93073 1101 aaKnown RBP17.26■□□□□ 0.35
NR1H3-235ENST00000616973 ZKSCAN4Q969J2 545 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-235ENST00000616973 CRACR2AQ9BSW2 395 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 POLD4Q9HCU8 107 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 DMAC2Q9NW81 257 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 FAM53CQ9NYF3 392 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 ZHX2Q9Y6X8 837 aa17.26■□□□□ 0.35
NR1H3-235ENST00000616973 HIP1RO75146 1068 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 EIF2AK2P19525 551 aaKnown RBP17.25■□□□□ 0.35
NR1H3-235ENST00000616973 PSMC2P35998 433 aaKnown RBP17.25■□□□□ 0.35
NR1H3-235ENST00000616973 QARSP47897 775 aaKnown RBP17.25■□□□□ 0.35
NR1H3-235ENST00000616973 ALCAMQ13740 583 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 MYBPC2Q14324 1141 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 ODR4Q5SWX8 454 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 NOL9Q5SY16 702 aaKnown RBP17.25■□□□□ 0.35
NR1H3-235ENST00000616973 TRIM58Q8NG06 486 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 SLC35C1Q96A29 364 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 RMDN3Q96TC7 470 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 TIPINQ9BVW5 301 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 ZNF446Q9NWS9 450 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 GPRC5DQ9NZD1 345 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 CTAGE15A4D2H0 777 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 ATP2A1O14983 1001 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 CLIC2O15247 247 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 CTAGE8P0CG41 777 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 SFNP31947 248 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 DSG3P32926 999 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 MAGEA1P43355 309 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 CASP4P49662 377 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 EXOC3L4Q17RC7 722 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 ZC2HC1CQ53FD0 456 aaPredicted RBP17.25■□□□□ 0.35
NR1H3-235ENST00000616973 HS2ST1Q7LGA3 356 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 CTAGE6Q86UF2 777 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 CTAGE4Q8IX94 777 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 C4orf19Q8IY42 314 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 DAW1Q8N136 415 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 TMEM174Q8WUU8 243 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 KLRG1Q96E93 195 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 ARID3AQ99856 593 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 RNF146Q9NTX7 359 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 PUF60Q9UHX1 559 aaKnown RBP17.25■□□□□ 0.35
NR1H3-235ENST00000616973 SAR1BQ9Y6B6 198 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 ARID2Q68CP9 1835 aa17.25■□□□□ 0.35
NR1H3-235ENST00000616973 PTPRFP10586 1907 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 PPP1R12BO60237 982 aaPredicted RBP17.24■□□□□ 0.35
NR1H3-235ENST00000616973 TACC1O75410 805 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 ATP1A1P05023 1023 aaKnown RBP17.24■□□□□ 0.35
NR1H3-235ENST00000616973 ZSCAN20P17040 1043 aaPredicted RBP17.24■□□□□ 0.35
NR1H3-235ENST00000616973 PON1P27169 355 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 JAK3P52333 1124 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 KRT76Q01546 638 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 KLHDC7AQ5VTJ3 777 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 GBP6Q6ZN66 633 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 SLC9A9Q8IVB4 645 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 MSANTD4Q8NCY6 345 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 RDM1Q8NG50 284 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 TRPM4Q8TD43 1214 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 PARD6BQ9BYG5 372 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 GBP3Q9H0R5 595 aa17.24■□□□□ 0.35
NR1H3-235ENST00000616973 PKD2L1Q9P0L9 805 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms