RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 NT5C1BQ96P26 610 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 PRMT1Q99873 361 aaKnown RBP15.78■□□□□ 0.12
VPS36-207ENST00000611132 TRIM51Q9BSJ1 452 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 AMNQ9BXJ7 453 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 EHD4Q9H223 541 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 STOML1Q9UBI4 398 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 LRRC10BA6NIK2 292 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 TTLL1O95922 423 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 SLC16A2P36021 539 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 CDK8P49336 464 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 DIXDC1Q155Q3 683 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 APBB1IPQ7Z5R6 666 aaPredicted RBP15.78■□□□□ 0.12
VPS36-207ENST00000611132 HDAC7Q8WUI4 952 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 RBM17Q96I25 401 aaKnown RBP15.78■□□□□ 0.12
VPS36-207ENST00000611132 TGS1Q96RS0 853 aaKnown RBP15.78■□□□□ 0.12
VPS36-207ENST00000611132 DDX23Q9BUQ8 820 aaKnown RBP15.78■□□□□ 0.12
VPS36-207ENST00000611132 BHMT2Q9H2M3 363 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 NOD2Q9HC29 1040 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 USP40Q9NVE5 1235 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 TNNI1P19237 187 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 KIAA1755Q5JYT7 1200 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 SFR1Q86XK3 245 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 LRRC37BQ96QE4 947 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 NBPF3Q9H094 633 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 GGT7Q9UJ14 662 aa15.78■□□□□ 0.12
VPS36-207ENST00000611132 RASA4BC9J798 803 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 KIF3CO14782 793 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 RASA4O43374 803 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 PDHA1P08559 390 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 SP4Q02446 784 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 KNOP1Q1ED39 458 aaKnown RBP15.77■□□□□ 0.12
VPS36-207ENST00000611132 SLFN13Q68D06 897 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 MIER3Q7Z3K6 550 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 GLYCTKQ8IVS8 523 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 PARVGQ9HBI0 331 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 BSDC1Q9NW68 430 aaPredicted RBP15.77■□□□□ 0.12
VPS36-207ENST00000611132 TMEM260Q9NX78 707 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 ARL2BPQ9Y2Y0 163 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 PNMA6FA0A0J9YX94 578 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 MAP3K7O43318 606 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 USP11P51784 963 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 TROAPQ12815 778 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 TMBIM4Q9HC24 238 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 ARHGEF10LQ9HCE6 1279 aa15.77■□□□□ 0.12
VPS36-207ENST00000611132 USP15Q9Y4E8 981 aaPredicted RBP15.77■□□□□ 0.12
VPS36-207ENST00000611132 MYMKA6NI61 221 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 TCP11X1B4DZS4 312 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 SKOR1P84550 965 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 CRYMQ14894 314 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 GNPTABQ3T906 1256 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 LOC102724428A0A0B4J2F2 783 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 TDP2O95551 362 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 HSPA9P38646 679 aaKnown RBP15.77■□□□□ 0.11
VPS36-207ENST00000611132 SIK1P57059 783 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 PTK2Q05397 1052 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 AOC3Q16853 763 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 MAP7D1Q3KQU3 841 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 RBM26Q5T8P6 1007 aaKnown RBP15.77■□□□□ 0.11
VPS36-207ENST00000611132 CCDC137Q6PK04 289 aaKnown RBP15.77■□□□□ 0.11
VPS36-207ENST00000611132 SPATA21Q7Z572 469 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 ANAPC4Q9UJX5 808 aa15.77■□□□□ 0.11
VPS36-207ENST00000611132 GLI1P08151 1106 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 MSH2P43246 934 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 GPC5P78333 572 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 GTF2IP78347 998 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 MAP3K21Q5TCX8 1036 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 KCTD1Q719H9 257 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 OGFOD1Q8N543 542 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 SYN2Q92777 582 aaPredicted RBP15.76■□□□□ 0.11
VPS36-207ENST00000611132 HOOK2Q96ED9 719 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 SH3GL3Q99963 347 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 ARHGAP20Q9P2F6 1191 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 RAD23BP54727 409 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 TCP10Q12799 353 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 ERFEQ4G0M1 354 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 RAPGEF5Q92565 580 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 POTEB3A0JP26 581 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 POTECB2RU33 542 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 ANXA13P27216 316 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 SCTRP47872 440 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 MKRN3Q13064 507 aaKnown RBP15.76■□□□□ 0.11
VPS36-207ENST00000611132 DRAP1Q14919 205 aaPredicted RBP15.76■□□□□ 0.11
VPS36-207ENST00000611132 POTEBQ6S5H4 581 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 EPM2AIP1Q7L775 607 aaPredicted RBP15.76■□□□□ 0.11
VPS36-207ENST00000611132 GRAMD1AQ96CP6 724 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 TRIM11Q96F44 468 aa15.76■□□□□ 0.11
VPS36-207ENST00000611132 EIF4E1BA6NMX2 242 aaKnown RBP15.75■□□□□ 0.11
VPS36-207ENST00000611132 DLATP10515 647 aaKnown RBP15.75■□□□□ 0.11
VPS36-207ENST00000611132 ESRRAP11474 423 aaPredicted RBP15.75■□□□□ 0.11
VPS36-207ENST00000611132 HMGB2P26583 209 aaKnown RBP15.75■□□□□ 0.11
VPS36-207ENST00000611132 PDIA5Q14554 519 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 TEX2Q8IWB9 1127 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 NGLY1Q96IV0 654 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 DONSONQ9NYP3 566 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 A0A087X0B3 334 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 FGFR4P22455 802 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 CCND1P24385 295 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 MXI1P50539 228 aa15.75■□□□□ 0.11
VPS36-207ENST00000611132 BPIFB4P59827 614 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms