RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ZC2HC1CQ53FD0 456 aaPredicted RBP30.8■■■□□ 2.52
CSPG5-205ENST00000610462 APOBEC3FQ8IUX4 373 aaKnown RBP30.8■■■□□ 2.52
CSPG5-205ENST00000610462 FAM178BQ8IXR5 827 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 PLCB1Q9NQ66 1216 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 ENC1O14682 589 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 CASP4P49662 377 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 MTMR1Q13613 665 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 TMCO3Q6UWJ1 677 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 PARD6BQ9BYG5 372 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 COL11A1P12107 1806 aaPredicted RBP30.8■■■□□ 2.52
CSPG5-205ENST00000610462 RLFQ13129 1914 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 ANO9A1A5B4 782 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 MACROD2A1Z1Q3 448 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 CTAGE15A4D2H0 777 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 TFRCP02786 760 aaKnown RBP30.79■■■□□ 2.52
CSPG5-205ENST00000610462 CTAGE8P0CG41 777 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 EIF2AK2P19525 551 aaKnown RBP30.79■■■□□ 2.52
CSPG5-205ENST00000610462 APBA1Q02410 837 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 TDRD12Q587J7 1177 aaKnown RBP30.79■■■□□ 2.52
CSPG5-205ENST00000610462 CTAGE6Q86UF2 777 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 GPIHBP1Q8IV16 184 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 CTAGE4Q8IX94 777 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 ZNF280CQ8ND82 737 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 TBC1D22BQ9NU19 505 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 FAM53CQ9NYF3 392 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 PHIPQ8WWQ0 1821 aa30.79■■■□□ 2.52
CSPG5-205ENST00000610462 MAGEA1P43355 309 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 DPY19L2P1Q6NXN4 242 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 RNF207Q6ZRF8 634 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 ZKSCAN4Q969J2 545 aaPredicted RBP30.78■■■□□ 2.52
CSPG5-205ENST00000610462 ATG4CQ96DT6 458 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 WRNIP1Q96S55 665 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 ZMYND15Q9H091 742 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 PICK1Q9NRD5 415 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 AIPL1Q9NZN9 384 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 SAR1BQ9Y6B6 198 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 RBAK-RBAKDNI3L0D1 243 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 PJA2O43164 708 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 PTPRAP18433 802 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 ODR4Q5SWX8 454 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 ANGEL2Q5VTE6 544 aaKnown RBP30.78■■■□□ 2.52
CSPG5-205ENST00000610462 TXLNBQ8N3L3 684 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 HDAC6Q9UBN7 1215 aa30.78■■■□□ 2.52
CSPG5-205ENST00000610462 DCAF17Q5H9S7 520 aaPredicted RBP30.77■■■□□ 2.52
CSPG5-205ENST00000610462 BORCS6Q96GS4 357 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 PXMP2Q9NR77 195 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 DBR1Q9UK59 544 aaKnown RBP30.77■■■□□ 2.52
CSPG5-205ENST00000610462 PCDHB13Q9Y5F0 798 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 HIP1RO75146 1068 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 ZRANB2O95218 330 aaKnown RBP eCLIP30.77■■■□□ 2.52
CSPG5-205ENST00000610462 MAPK7Q13164 816 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 BMS1Q14692 1282 aaKnown RBP30.77■■■□□ 2.52
CSPG5-205ENST00000610462 R3HDM1Q15032 1099 aaKnown RBP30.77■■■□□ 2.52
CSPG5-205ENST00000610462 PADI6Q6TGC4 694 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 TRIM58Q8NG06 486 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 SLC35C1Q96A29 364 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 RMDN3Q96TC7 470 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 PDCD2LQ9BRP1 358 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 ZHX2Q9Y6X8 837 aa30.77■■■□□ 2.52
CSPG5-205ENST00000610462 POTEB2H3BUK9 544 aa30.76■■■□□ 2.51
CSPG5-205ENST00000610462 SLC9A1P19634 815 aa30.76■■■□□ 2.51
CSPG5-205ENST00000610462 GFPT1Q06210 699 aaPredicted RBP30.76■■■□□ 2.51
CSPG5-205ENST00000610462 RAPGEF1Q13905 1077 aa30.76■■■□□ 2.51
CSPG5-205ENST00000610462 EXOC3L4Q17RC7 722 aa30.76■■■□□ 2.51
CSPG5-205ENST00000610462 TACC1O75410 805 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 PSMC2P35998 433 aaKnown RBP30.75■■■□□ 2.51
CSPG5-205ENST00000610462 TCERG1LQ5VWI1 586 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 DAW1Q8N136 415 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 FBXO41Q8TF61 875 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 WNK4Q96J92 1243 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 C12orf42Q96LP6 360 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 MKNK1Q9BUB5 465 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 IKZF4Q9H2S9 585 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 SAMM50Q9Y512 469 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 LYPLA2O95372 231 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 MYCLP12524 364 aaPredicted RBP30.75■■■□□ 2.51
CSPG5-205ENST00000610462 ACTN1P12814 892 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 PON1P27169 355 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 QARSP47897 775 aaKnown RBP30.75■■■□□ 2.51
CSPG5-205ENST00000610462 ASIC2Q16515 512 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 KLHDC7AQ5VTJ3 777 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 NSMFQ6X4W1 530 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 FAM186BQ8IYM0 893 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 STRA6Q9BX79 667 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 RNF146Q9NTX7 359 aa30.75■■■□□ 2.51
CSPG5-205ENST00000610462 PRAMEF18Q5VWM3 479 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 HS2ST1Q7LGA3 356 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 KSR1Q8IVT5 923 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 MSANTD4Q8NCY6 345 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 ANKZF1Q9H8Y5 726 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 ARHGEF16Q5VV41 709 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 GBP6Q6ZN66 633 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 REPS2Q8NFH8 660 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 GBP3Q9H0R5 595 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 MLXIPQ9HAP2 919 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 RIPK3Q9Y572 518 aa30.74■■■□□ 2.51
CSPG5-205ENST00000610462 GTPBP10A4D1E9 387 aaKnown RBP30.73■■■□□ 2.51
CSPG5-205ENST00000610462 PPP1R12BO60237 982 aaPredicted RBP30.73■■■□□ 2.51
CSPG5-205ENST00000610462 PPP1R37O75864 691 aa30.73■■■□□ 2.51
CSPG5-205ENST00000610462 COG2Q14746 738 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms