RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 GNGT1P63211 74 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 BMT2Q1RMZ1 405 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 GBP6Q6ZN66 633 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 IQCKQ8N0W5 287 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 SPICE1Q8N0Z3 855 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 GMCL1P1Q8NEA9 526 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 TMEM59LQ9UK28 342 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 ALDH1B1P30837 517 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 CIITAP33076 1130 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 CTTNQ14247 550 aaKnown RBP22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 KCTD19Q17RG1 926 aaPredicted RBP22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 CFAP58Q5T655 872 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 PODNQ7Z5L7 613 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 GMCL1Q96IK5 515 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 SCN9AQ15858 1988 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 AFF2P51816 1311 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 SPATA31A6Q5VVP1 1343 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 TGFB1I1O43294 461 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 RPL13P26373 211 aaKnown RBP22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 PRKCIP41743 596 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 MMP14P50281 582 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 JAM2P57087 298 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 TNNC1P63316 161 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 PIK3R5Q8WYR1 880 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 ZBTB39O15060 712 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 EIF3HO15372 352 aaKnown RBP eCLIP22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 CEP104O60308 925 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 FLOT1O75955 427 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 EYA4O95677 639 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 GH2P01242 217 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 BMP3P12645 472 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 CCT5P48643 541 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 SLC20A2Q08357 652 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 MCTP2Q6DN12 878 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 RINT1Q6NUQ1 792 aa22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 METTL14Q9HCE5 456 aaKnown RBP22.1■■□□□ 1.13
SHKBP1-225ENST00000600733 SLC16A3O15427 465 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 NMT1P30419 496 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 ZC2HC1CQ53FD0 456 aaPredicted RBP22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 PROCA1Q8NCQ7 364 aaPredicted RBP22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 TPCN2Q8NHX9 752 aa22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 POLR3CQ9BUI4 534 aaPredicted RBP22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 TMX4Q9H1E5 349 aaPredicted RBP22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 ZMYM2Q9UBW7 1377 aa22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 COL11A2P13942 1736 aaPredicted RBP22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 A0A1W2PRG0 241 aa22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 CHMP2AO43633 222 aa22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 RRP1BQ14684 758 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 KSR1Q8IVT5 923 aa22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 BCAS4Q8TDM0 211 aa22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 AP1M1Q9BXS5 423 aa22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 NENFQ9UMX5 172 aa22.09■■□□□ 1.13
SHKBP1-225ENST00000600733 IGLV3-22A0A075B6J6 115 aa22.08■■□□□ 1.13
SHKBP1-225ENST00000600733 DDX3XO00571 662 aaKnown RBP eCLIP22.08■■□□□ 1.135e-8■■■■■ 77.1
SHKBP1-225ENST00000600733 ATP1A2P50993 1020 aa22.08■■□□□ 1.13
SHKBP1-225ENST00000600733 CORO7P57737 925 aa22.08■■□□□ 1.13
SHKBP1-225ENST00000600733 ERVK-9P63128 1117 aa22.08■■□□□ 1.13
SHKBP1-225ENST00000600733 DACT2Q5SW24 774 aa22.08■■□□□ 1.13
SHKBP1-225ENST00000600733 MREGQ8N565 214 aa22.08■■□□□ 1.13
SHKBP1-225ENST00000600733 OLFML3Q9NRN5 406 aa22.08■■□□□ 1.13
SHKBP1-225ENST00000600733 CES2O00748 559 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 GFPT2O94808 682 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 PDCLQ13371 301 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 IFI16Q16666 785 aaKnown RBP22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 TPH2Q8IWU9 490 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 MYCT1Q8N699 235 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 METTL13Q8N6R0 699 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 ZNF622Q969S3 477 aaKnown RBP eCLIP22.08■■□□□ 1.122e-8■□□□□ 10.5
SHKBP1-225ENST00000600733 BORCS6Q96GS4 357 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 WDR18Q9BV38 432 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 FBXL5Q9UKA1 691 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 PRR12Q9ULL5 1215 aa22.08■■□□□ 1.12
SHKBP1-225ENST00000600733 TMCO5BA8MYB1 307 aa22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 ZBTB48P10074 688 aaPredicted RBP22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 COG2Q14746 738 aa22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 STRIP1Q5VSL9 837 aa22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 WHAMMQ8TF30 809 aa22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 SCFD2Q8WU76 684 aa22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 PBKQ96KB5 322 aa22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 HSD17B14Q9BPX1 270 aa22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 TDRD3Q9H7E2 651 aaKnown RBP22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 STK24Q9Y6E0 443 aa22.07■■□□□ 1.12
SHKBP1-225ENST00000600733 FAM13AO94988 1023 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 SKOR1P84550 965 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 HLTFQ14527 1009 aaKnown RBP eCLIP22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 ACTRT1Q8TDG2 376 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 U2AF1L4Q8WU68 220 aaKnown RBP22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 DYDC2Q96IM9 177 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 TAF1DQ9H5J8 278 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 FAM170AA1A519 330 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 ECE2O60344 883 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 SLITRK3O94933 977 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 CYP3A4P08684 503 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 H2AFZP0C0S5 128 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 UBXN2AP68543 259 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 H2AFVQ71UI9 128 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 OTOP1Q7RTM1 612 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 PEX26Q7Z412 305 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 VPS36Q86VN1 386 aa22.06■■□□□ 1.12
SHKBP1-225ENST00000600733 FAM186BQ8IYM0 893 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms