RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 LONP1P36776 959 aaKnown RBP16.79■□□□□ 0.28
TRIM28-207ENST00000597136 SLC26A2P50443 739 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 PRKCEQ02156 737 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 TPRNQ4KMQ1 711 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 RUFY4Q6ZNE9 571 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 IGSF22Q8N9C0 903 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 GBF1Q92538 1859 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 BADQ92934 168 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 HSD17B14Q9BPX1 270 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 PTPRSQ13332 1948 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 TIMP1P01033 207 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 P4HBP07237 508 aaKnown RBP16.78■□□□□ 0.28
TRIM28-207ENST00000597136 CMA1P23946 247 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 CDC25AP30304 524 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 QARSP47897 775 aaKnown RBP16.78■□□□□ 0.28
TRIM28-207ENST00000597136 CCL23P55773 120 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 PSMC5P62195 406 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 PDIA5Q14554 519 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 TMEM266Q2M3C6 531 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
TRIM28-207ENST00000597136 SPECC1Q5M775 1068 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 SHC4Q6S5L8 630 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 SERINC5Q86VE9 423 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 TPH2Q8IWU9 490 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 BBXQ8WY36 941 aaPredicted RBP16.78■□□□□ 0.28
TRIM28-207ENST00000597136 HIPK3Q9H422 1215 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 PRKAG2Q9UGJ0 569 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 MICAL3Q7RTP6 2002 aa16.78■□□□□ 0.28
TRIM28-207ENST00000597136 PP2D1A8MPX8 630 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 MED24O75448 989 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 OATP04181 439 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 SPATA31C1P0DKV0 1188 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 KLRC1P26715 233 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 PTK7Q13308 1070 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 RESP18Q5W5W9 173 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 ANO5Q75V66 913 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 SCLYQ96I15 445 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 AK8Q96MA6 479 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 LXNQ9BS40 222 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 WNT8AQ9H1J5 351 aa16.77■□□□□ 0.28
TRIM28-207ENST00000597136 MBLAC1A4D2B0 266 aaPredicted RBP16.77■□□□□ 0.27
TRIM28-207ENST00000597136 RRN3P2A6NIE6 340 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 GNAT1P11488 350 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 PTMSP20962 102 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.27
TRIM28-207ENST00000597136 NPEPPSP55786 919 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 ECM1Q16610 540 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 MTHFD1LQ6UB35 978 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 USP49Q70CQ1 688 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 CATSPER3Q86XQ3 398 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 EPSTI1Q96J88 318 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 RAB34Q9BZG1 259 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 NRBP2Q9NSY0 501 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 LRWD1Q9UFC0 647 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 TUBE1Q9UJT0 475 aa16.77■□□□□ 0.27
TRIM28-207ENST00000597136 CKBP12277 381 aa16.76■□□□□ 0.27
TRIM28-207ENST00000597136 TARBP2Q15633 366 aaKnown RBP16.76■□□□□ 0.27
TRIM28-207ENST00000597136 XKR3Q5GH77 459 aa16.76■□□□□ 0.27
TRIM28-207ENST00000597136 ZNF484Q5JVG2 852 aa16.76■□□□□ 0.27
TRIM28-207ENST00000597136 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
TRIM28-207ENST00000597136 MFSD5Q6N075 450 aa16.76■□□□□ 0.27
TRIM28-207ENST00000597136 FSIP1Q8NA03 581 aa16.76■□□□□ 0.27
TRIM28-207ENST00000597136 MRPS27Q92552 414 aaKnown RBP16.76■□□□□ 0.27
TRIM28-207ENST00000597136 SYMPKQ92797 1274 aaKnown RBP16.76■□□□□ 0.27
TRIM28-207ENST00000597136 CEP89Q96ST8 783 aa16.76■□□□□ 0.27
TRIM28-207ENST00000597136 OSBPL7Q9BZF2 842 aa16.76■□□□□ 0.27
TRIM28-207ENST00000597136 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
TRIM28-207ENST00000597136 SEPT9Q9UHD8 586 aaPredicted RBP16.76■□□□□ 0.27
TRIM28-207ENST00000597136 A0A1B0GVL5 298 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 CSF2RAP15509 400 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 EPHB4P54760 987 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 MTERF2Q49AM1 385 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 ZNF618Q5T7W0 954 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 TRAF7Q6Q0C0 670 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 C4orf19Q8IY42 314 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 DNAJB3Q8WWF6 145 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 VWCEQ96DN2 955 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 FAM167AQ96KS9 214 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 GDF15Q99988 308 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 MMTAG2Q9BU76 263 aaKnown RBP16.75■□□□□ 0.27
TRIM28-207ENST00000597136 NIFKQ9BYG3 293 aaKnown RBP16.75■□□□□ 0.27
TRIM28-207ENST00000597136 ZSWIM4Q9H7M6 989 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 COL1A2P08123 1366 aa16.75■□□□□ 0.27
TRIM28-207ENST00000597136 LAMA3Q16787 3333 aa16.74■□□□□ 0.27
TRIM28-207ENST00000597136 FAM237AA0A1B0GTK4 181 aa16.74■□□□□ 0.27
TRIM28-207ENST00000597136 THPOP40225 353 aa16.74■□□□□ 0.27
TRIM28-207ENST00000597136 GPNMBQ14956 572 aa16.74■□□□□ 0.27
TRIM28-207ENST00000597136 C16orf59Q7L2K0 433 aa16.74■□□□□ 0.27
TRIM28-207ENST00000597136 GPT2Q8TD30 523 aa16.74■□□□□ 0.27
TRIM28-207ENST00000597136 PIGOQ8TEQ8 1089 aa16.74■□□□□ 0.27
TRIM28-207ENST00000597136 FAM49AQ9H0Q0 323 aaPredicted RBP16.74■□□□□ 0.27
TRIM28-207ENST00000597136 HPSEQ9Y251 543 aa16.74■□□□□ 0.27
TRIM28-207ENST00000597136 PCDHA2Q9Y5H9 948 aa16.74■□□□□ 0.27
TRIM28-207ENST00000597136 C22orf31O95567 290 aa16.73■□□□□ 0.27
TRIM28-207ENST00000597136 IQCF3P0C7M6 154 aa16.73■□□□□ 0.27
TRIM28-207ENST00000597136 PFKFB1P16118 471 aa16.73■□□□□ 0.27
TRIM28-207ENST00000597136 LIG1P18858 919 aa16.73■□□□□ 0.27
TRIM28-207ENST00000597136 YWHABP31946 246 aaKnown RBP16.73■□□□□ 0.27
TRIM28-207ENST00000597136 UBA7P41226 1012 aa16.73■□□□□ 0.27
TRIM28-207ENST00000597136 NDUFA8P51970 172 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms