RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 MYO6Q9UM54 1294 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 SAMM50Q9Y512 469 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 PCDHA10Q9Y5I2 948 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 DICER1Q9UPY3 1922 aaKnown RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 SSU72P8A0A1W2PR75 194 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 GTPBP10A4D1E9 387 aaKnown RBP11.43□□□□□ -0.58
VPS25-203ENST00000589520 SPDYE16A6NNV3 312 aaPredicted RBP11.43□□□□□ -0.58
VPS25-203ENST00000589520 PRPF6O94906 941 aaKnown RBP11.43□□□□□ -0.58
VPS25-203ENST00000589520 ICAM3P32942 547 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 CACNB1Q02641 598 aaPredicted RBP11.43□□□□□ -0.58
VPS25-203ENST00000589520 ITGB3BPQ13352 177 aaPredicted RBP11.43□□□□□ -0.58
VPS25-203ENST00000589520 SPA17Q15506 151 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 SLC30A10Q6XR72 485 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.43□□□□□ -0.58
VPS25-203ENST00000589520 CACNA2D4Q7Z3S7 1137 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 RIOX2Q8IUF8 465 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 SLC9A9Q8IVB4 645 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 ATP6V0A1Q93050 837 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 MMRN2Q9H8L6 949 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 LUC7LQ9NQ29 371 aaKnown RBP11.43□□□□□ -0.58
VPS25-203ENST00000589520 PLCB1Q9NQ66 1216 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 FBXL5Q9UKA1 691 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 SNCAIPQ9Y6H5 919 aa11.43□□□□□ -0.58
VPS25-203ENST00000589520 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 TESPA1A2RU30 521 aaPredicted RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 RASSF10A6NK89 507 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 KRT86O43790 486 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 USO1O60763 962 aaKnown RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 SLC25A27O95847 323 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 AFPP02771 609 aaKnown RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 NR3C1P04150 777 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 PSAPP07602 524 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 MYBP10242 640 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 XRCC5P13010 732 aaKnown RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 ANXA13P27216 316 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 YWHABP31946 246 aaKnown RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 RARRES1P49788 294 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 RAD51AP2Q09MP3 1159 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 VGLL4Q14135 290 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 STXBP2Q15833 593 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 ODR4Q5SWX8 454 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 PRAMEF18Q5VWM3 479 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 WDR59Q6PJI9 974 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 FASTKD5Q7L8L6 764 aaKnown RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 C12orf56Q8IXR9 622 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 BANK1Q8NDB2 785 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 GLIS3Q8NEA6 775 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 IL31RAQ8NI17 732 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 GTF3C2Q8WUA4 911 aaPredicted RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 VTI1AQ96AJ9 217 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 HVCN1Q96D96 273 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 CCDC42Q96M95 316 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 STRA6Q9BX79 667 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 GBP3Q9H0R5 595 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 NHEJ1Q9H9Q4 299 aaPredicted RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 AGPAT5Q9NUQ2 364 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 RIPK3Q9Y572 518 aa11.42□□□□□ -0.58
VPS25-203ENST00000589520 BZW2Q9Y6E2 419 aaKnown RBP11.42□□□□□ -0.58
VPS25-203ENST00000589520 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
VPS25-203ENST00000589520 SPATA31C2B4DYI2 1134 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 H0YCG3 227 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 RNF225M0QZC1 329 aaPredicted RBP11.41□□□□□ -0.58
VPS25-203ENST00000589520 IRF6O14896 467 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 MAPK13O15264 365 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 HIP1RO75146 1068 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 PLS3P13797 630 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 OSBPP22059 807 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 SMTNP53814 917 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 RTP1P59025 263 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 KCNMA1Q12791 1236 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 KCNH2Q12809 1159 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 MAPK8IP2Q13387 824 aaPredicted RBP11.41□□□□□ -0.58
VPS25-203ENST00000589520 DGKZQ13574 1117 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 MTF1Q14872 753 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 PPP2R5AQ15172 486 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 SLC9C1Q4G0N8 1177 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 C9orf131Q5VYM1 1079 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 MIS18BP1Q6P0N0 1132 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 ARMC9Q7Z3E5 817 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
VPS25-203ENST00000589520 ACCSQ96QU6 501 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 CHP1Q99653 195 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 DESI2Q9BSY9 194 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 FGFBP2Q9BYJ0 223 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 DMAC2Q9NW81 257 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 EXOC7Q9UPT5 735 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 KCNH4Q9UQ05 1017 aa11.41□□□□□ -0.58
VPS25-203ENST00000589520 CTAGE9A4FU28 777 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 IQCA1LA6NCM1 817 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 SPDYE5A6NIY4 337 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 RSPH10B2B2RC85 870 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 DDX39AO00148 427 aaKnown RBP11.4□□□□□ -0.58
VPS25-203ENST00000589520 TGFB1I1O43294 461 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 PPP1R37O75864 691 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 URI1O94763 535 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms