RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 IQCF3P0C7M6 154 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 MARCKSP29966 332 aaPredicted RBP14.14□□□□□ -0.15
RETREG3-203ENST00000585894 PRPHP41219 470 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 FPGSQ05932 587 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 BFSP2Q13515 415 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 ECM1Q16610 540 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 POTEGQ6S5H5 508 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 LRRC8DQ7L1W4 858 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 DEFB128Q7Z7B8 93 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 CATSPER3Q86XQ3 398 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 LRRC71Q8N4P6 559 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 RETREG2Q8NC44 543 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 VWCEQ96DN2 955 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 UBE2OQ9C0C9 1292 aaKnown RBP14.14□□□□□ -0.15
RETREG3-203ENST00000585894 ZSWIM4Q9H7M6 989 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 COLQQ9Y215 455 aaPredicted RBP14.14□□□□□ -0.15
RETREG3-203ENST00000585894 COL1A2P08123 1366 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 TCHHQ07283 1943 aa14.14□□□□□ -0.15
RETREG3-203ENST00000585894 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 BRD1O95696 1058 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 SELPP16109 830 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 YWHABP31946 246 aaKnown RBP14.13□□□□□ -0.15
RETREG3-203ENST00000585894 CLCN3P51790 818 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 MBTPS1Q14703 1052 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 GPNMBQ14956 572 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 TARBP2Q15633 366 aaKnown RBP14.13□□□□□ -0.15
RETREG3-203ENST00000585894 C9orf50Q5SZB4 431 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 C16orf59Q7L2K0 433 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 C4orf19Q8IY42 314 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 TMEM199Q8N511 208 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 CCDC155Q8N6L0 562 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 METTL13Q8N6R0 699 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 CAGE1Q8TC20 777 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 PIGOQ8TEQ8 1089 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 CEP89Q96ST8 783 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 NIFKQ9BYG3 293 aaKnown RBP14.13□□□□□ -0.15
RETREG3-203ENST00000585894 PCDHA2Q9Y5H9 948 aa14.13□□□□□ -0.15
RETREG3-203ENST00000585894 CCT6AP40227 531 aaKnown RBP14.12□□□□□ -0.15
RETREG3-203ENST00000585894 RBL2Q08999 1139 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 DRP2Q13474 957 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 ZRSR1Q15695 479 aaKnown RBP14.12□□□□□ -0.15
RETREG3-203ENST00000585894 TAF2Q6P1X5 1199 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 SNX29Q8TEQ0 813 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 TNPO1Q92973 898 aaKnown RBP14.12□□□□□ -0.15
RETREG3-203ENST00000585894 ZNF668Q96K58 619 aaPredicted RBP14.12□□□□□ -0.15
RETREG3-203ENST00000585894 PLIN2Q99541 437 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 MMTAG2Q9BU76 263 aaKnown RBP14.12□□□□□ -0.15
RETREG3-203ENST00000585894 PRO3102Q9H379 93 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 SUGCTQ9HAC7 445 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 CYP26B1Q9NR63 512 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 NBNO60934 754 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 CHRNA1P02708 482 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 TBC1D8BQ0IIM8 1120 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 XKR9Q5GH70 373 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 KIAA0319LQ8IZA0 1049 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 ERMNQ8TAM6 284 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 NEK9Q8TD19 979 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 CEP170P1Q96L14 293 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 CLIC6Q96NY7 704 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 CEP131Q9UPN4 1083 aa14.12□□□□□ -0.15
RETREG3-203ENST00000585894 LAMA3Q16787 3333 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 RSPH10B2B2RC85 870 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 VTNP04004 478 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 RSPH10BP0C881 870 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 RPA1P27694 616 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 ANP32AP39687 249 aaKnown RBP14.11□□□□□ -0.15
RETREG3-203ENST00000585894 DNM1Q05193 864 aaKnown RBP14.11□□□□□ -0.15
RETREG3-203ENST00000585894 PPIGQ13427 754 aaKnown RBP eCLIP14.11□□□□□ -0.158e-8■□□□□ 10.3
RETREG3-203ENST00000585894 PDIA5Q14554 519 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 SHHQ15465 462 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 TCTN1Q2MV58 587 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 SPECC1Q5M775 1068 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 ARL6IP4Q66PJ3 421 aaKnown RBP14.11□□□□□ -0.15
RETREG3-203ENST00000585894 EFCAB12Q6NXP0 572 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.11□□□□□ -0.157e-6■■□□□ 11.5
RETREG3-203ENST00000585894 POLR3CQ9BUI4 534 aaPredicted RBP14.11□□□□□ -0.15
RETREG3-203ENST00000585894 RAB34Q9BZG1 259 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 TUFT1Q9NNX1 390 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 FBXO2Q9UK22 296 aaPredicted RBP14.11□□□□□ -0.15
RETREG3-203ENST00000585894 CDY2AQ9Y6F7 541 aa14.11□□□□□ -0.15
RETREG3-203ENST00000585894 SMIM35A0A1B0GVV1 85 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 DKC1O60832 514 aaKnown RBP eCLIP14.1□□□□□ -0.15
RETREG3-203ENST00000585894 LYPLA2O95372 231 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 BMP15O95972 392 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 DDIT3P35638 169 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 MRPS6P82932 125 aaKnown RBP14.1□□□□□ -0.15
RETREG3-203ENST00000585894 MGAT3Q09327 533 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
RETREG3-203ENST00000585894 HAUS3Q68CZ6 603 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 USP49Q70CQ1 688 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 ZNF365Q70YC5 407 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 LINC01465Q8N7H1 131 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 CDHR5Q9HBB8 845 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 IL23AQ9NPF7 189 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 DDX19AQ9NUU7 478 aaKnown RBP14.1□□□□□ -0.15
RETREG3-203ENST00000585894 KIAA1024Q9UPX6 916 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 GINS2Q9Y248 185 aa14.1□□□□□ -0.15
RETREG3-203ENST00000585894 NASPP49321 788 aaPredicted RBP14.1□□□□□ -0.15
RETREG3-203ENST00000585894 RARRES1P49788 294 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms