RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 GDPD2Q9HCC8 539 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 NRBP2Q9NSY0 501 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 RGL1Q9NZL6 768 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 WRAP73Q9P2S5 460 aaPredicted RBP11.63□□□□□ -0.55
CCDC47-203ENST00000580986 USP25Q9UHP3 1055 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 A0A1W2PQ45 241 aaPredicted RBP11.62□□□□□ -0.55
CCDC47-203ENST00000580986 A0A1W2PQY0 241 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 GOLGA6L4A6NEF3 574 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 RRN3P2A6NIE6 340 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 GAS2O43903 313 aaKnown RBP11.62□□□□□ -0.55
CCDC47-203ENST00000580986 SORBS3O60504 671 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 STBD1O95210 358 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 TFRCP02786 760 aaKnown RBP11.62□□□□□ -0.55
CCDC47-203ENST00000580986 RPLP2P05387 115 aaKnown RBP11.62□□□□□ -0.55
CCDC47-203ENST00000580986 MYL3P08590 195 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 ZNF286BP0CG31 522 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 ATP4AP20648 1035 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 CDC25AP30304 524 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 YWHABP31946 246 aaKnown RBP11.62□□□□□ -0.55
CCDC47-203ENST00000580986 PSEN2P49810 448 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 CYP4A11Q02928 519 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 GRB10Q13322 594 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 MFSD10Q14728 455 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 SNX17Q15036 470 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 PLCB4Q15147 1175 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 TARBP2Q15633 366 aaKnown RBP11.62□□□□□ -0.55
CCDC47-203ENST00000580986 KIAA0753Q2KHM9 967 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 CXCL17Q6UXB2 119 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 UBE2Q1Q7Z7E8 422 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 TRIM50Q86XT4 487 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 TPH2Q8IWU9 490 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 BANK1Q8NDB2 785 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 ABHD8Q96I13 439 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 CDK5RAP3Q96JB5 506 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 KCND2Q9NZV8 630 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 DNM3Q9UQ16 869 aa11.62□□□□□ -0.55
CCDC47-203ENST00000580986 MROH7Q68CQ1 1323 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 A0A0U1RQG5 324 aaPredicted RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 EYA4O95677 639 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 GNAT1P11488 350 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 PLCG1P19174 1290 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 PTMSP20962 102 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 RARRES1P49788 294 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 ADAM17P78536 824 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 CTTNQ14247 550 aaKnown RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 KARSQ15046 597 aaKnown RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 E2F4Q16254 413 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 ECM1Q16610 540 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 ZNF484Q5JVG2 852 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 VARS2Q5ST30 1063 aaKnown RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 UTP14CQ5TAP6 766 aaKnown RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 USP49Q70CQ1 688 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 ANO5Q75V66 913 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 ELOA2Q8IYF1 753 aaPredicted RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 IQUBQ8NA54 791 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 PNMA5Q96PV4 448 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 CEP89Q96ST8 783 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 JPH2Q9BR39 696 aaPredicted RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 TIPINQ9BVW5 301 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 RNPEPQ9H4A4 650 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 STARD7Q9NQZ5 370 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 DDX19AQ9NUU7 478 aaKnown RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 GTF2IRD1Q9UHL9 959 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 KCNH3Q9ULD8 1083 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 KIAA1024Q9UPX6 916 aa11.61□□□□□ -0.55
CCDC47-203ENST00000580986 KIAA0100Q14667 2235 aaKnown RBP11.61□□□□□ -0.55
CCDC47-203ENST00000580986 MBLAC1A4D2B0 266 aaPredicted RBP11.6□□□□□ -0.55
CCDC47-203ENST00000580986 DDX11L8A8MPP1 907 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 ZBTB42B2RXF5 422 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 MAGEB2O15479 319 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 MYCP01106 439 aaPredicted RBP11.6□□□□□ -0.55
CCDC47-203ENST00000580986 MYL1P05976 194 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 PFKFB1P16118 471 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 RFC5P40937 340 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 CDK7P50613 346 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 FAM160A1Q05DH4 1040 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 ITGA7Q13683 1181 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 NAALADL2Q58DX5 795 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 SPECC1Q5M775 1068 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 RRAGBQ5VZM2 374 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 TMEM92Q6UXU6 159 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 NECAB2Q7Z6G3 386 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 CKAP2LQ8IYA6 745 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 C7orf31Q8N865 590 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 SYT2Q8N9I0 419 aaPredicted RBP11.6□□□□□ -0.55
CCDC47-203ENST00000580986 FSIP1Q8NA03 581 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 ENGASEQ8NFI3 743 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 LARP4BQ92615 738 aaKnown RBP11.6□□□□□ -0.55
CCDC47-203ENST00000580986 TIGD1Q96MW7 591 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 TNMDQ9H2S6 317 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 CYP26B1Q9NR63 512 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 LMBRD1Q9NUN5 540 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 BLOC1S4Q9NUP1 217 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 GRIN2DO15399 1336 aa11.6□□□□□ -0.55
CCDC47-203ENST00000580986 DNAH12Q6ZR08 3092 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 A0A087X0B3 334 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 IGKV6-21A0A0C4DH24 114 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 ARVCFO00192 962 aa11.59□□□□□ -0.55
CCDC47-203ENST00000580986 DGAT1O75907 488 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms