RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CHMP4BP1P59074 171 aa17.74■□□□□ 0.43
CSNK1D-212ENST00000580061 TARBP2Q15633 366 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-212ENST00000580061 LONRF3Q496Y0 759 aa17.74■□□□□ 0.43
CSNK1D-212ENST00000580061 SYT2Q8N9I0 419 aaPredicted RBP17.74■□□□□ 0.43
CSNK1D-212ENST00000580061 LARP4BQ92615 738 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-212ENST00000580061 SH2D3AQ9BRG2 576 aa17.74■□□□□ 0.43
CSNK1D-212ENST00000580061 BHMT2Q9H2M3 363 aa17.74■□□□□ 0.43
CSNK1D-212ENST00000580061 CUEDC2Q9H467 287 aa17.74■□□□□ 0.43
CSNK1D-212ENST00000580061 USP25Q9UHP3 1055 aa17.74■□□□□ 0.43
CSNK1D-212ENST00000580061 GRIN2DO15399 1336 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 EVPLQ92817 2033 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 ZBTB42B2RXF5 422 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 ACTN4O43707 911 aaKnown RBP17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 SMIM10L2AP0DMW4 78 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 SMIM10L2BP0DMW5 78 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 SLC12A3P55017 1021 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 NPEPPSP55786 919 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 ITGA7Q13683 1181 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 NBPF20Q3BBV1 942 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 MTERF2Q49AM1 385 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 XKR9Q5GH70 373 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 ZNF484Q5JVG2 852 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 PPP1R13LQ8WUF5 828 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 CEP170P1Q96L14 293 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 CEP89Q96ST8 783 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 STARD7Q9NQZ5 370 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 CYP26B1Q9NR63 512 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 SERTAD1Q9UHV2 236 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 COL1A2P08123 1366 aa17.73■□□□□ 0.43
CSNK1D-212ENST00000580061 NRCAMQ92823 1304 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 ARHGEF35A5YM69 484 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 SLFN14P0C7P3 912 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 HOXC8P31273 242 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 PPFIA1Q13136 1202 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 MCM6Q14566 821 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 NFRKBQ6P4R8 1299 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 KRBA2Q6ZNG9 492 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 SESTD1Q86VW0 696 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 C7orf31Q8N865 590 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 GPT2Q8TD30 523 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 VTI1AQ96AJ9 217 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 CCDC43Q96MW1 224 aaKnown RBP17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 HDAC6Q9UBN7 1215 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 PPME1Q9Y570 386 aa17.72■□□□□ 0.43
CSNK1D-212ENST00000580061 RRN3P2A6NIE6 340 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 COL6A1P12109 1028 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 PTMSP20962 102 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 HIC1Q14526 733 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 DHX8Q14562 1220 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 NFKBIBQ15653 356 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 GRIK4Q16099 956 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 SV2BQ7L1I2 683 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 CEP57L1Q8IYX8 460 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 SLC43A3Q8NBI5 491 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 CNNM3Q8NE01 707 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 DIS3LQ8TF46 1054 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 LMBR1Q8WVP7 490 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 TRAPPC12Q8WVT3 735 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 ABHD8Q96I13 439 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 TIGD1Q96MW7 591 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 SENP6Q9GZR1 1112 aaPredicted RBP17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 TNMDQ9H2S6 317 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 MAGEF1Q9HAY2 307 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 SETD4Q9NVD3 440 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 KBTBD4Q9NVX7 518 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 DACT1Q9NYF0 836 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 GTF2IRD1Q9UHL9 959 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 MYH11P35749 1972 aa17.71■□□□□ 0.43
CSNK1D-212ENST00000580061 A0A0U1RQG5 324 aaPredicted RBP17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 C17orf102A2RUQ5 167 aa17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 MBD3O95983 291 aa17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 SSBP05455 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 EN2P19622 333 aaPredicted RBP17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 IGBP1P78318 339 aa17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 ADAM17P78536 824 aa17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 PTPN11Q06124 597 aaPredicted RBP17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 FAM47CQ5HY64 1035 aa17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 MARCH8Q5T0T0 291 aa17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 RINT1Q6NUQ1 792 aa17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 PADI6Q6TGC4 694 aa17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 MTRQ99707 1265 aa17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 DHX33Q9H6R0 707 aaKnown RBP17.7■□□□□ 0.42
CSNK1D-212ENST00000580061 ARVCFO00192 962 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 KINO60870 393 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 MAFO75444 373 aaPredicted RBP17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 DGAT1O75907 488 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 GNAT1P11488 350 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 CYP11B2P19099 503 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 RFC5P40937 340 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 ARSHQ5FYA8 562 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 GDF6Q6KF10 455 aaPredicted RBP17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 C1orf186Q6ZWK4 172 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 SH3RF1Q7Z6J0 888 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 STAMQ92783 540 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 PAGE5Q96GU1 130 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 PAWRQ96IZ0 340 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 SEZ6LQ9BYH1 1024 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 C11orf49Q9H6J7 331 aa17.69■□□□□ 0.42
CSNK1D-212ENST00000580061 PDLIM7Q9NR12 457 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms