RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 RLFQ13129 1914 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 LRRIQ3A6PVS8 624 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-214ENST00000567572 BTNL10A8MVZ5 291 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 PDXKO00764 312 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 SLC16A3O15427 465 aaKnown RBP19.45■□□□□ 0.7
CMTM3-214ENST00000567572 CLSTN1O94985 981 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 MOCS3O95396 460 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 SPATA31C1P0DKV0 1188 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 TNFRSF8P28908 595 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 PAFAH1B1P43034 410 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 ADAM9Q13443 819 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 SLC18A3Q16572 532 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 CEP55Q53EZ4 464 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 EPM2AIP1Q7L775 607 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-214ENST00000567572 MCF2L2Q86YR7 1114 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 SMCR8Q8TEV9 937 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-214ENST00000567572 SLC5A5Q92911 643 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 POLR3CQ9BUI4 534 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-214ENST00000567572 SUGCTQ9HAC7 445 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 MLXIPQ9HAP2 919 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 RAVER2Q9HCJ3 691 aaKnown RBP19.45■□□□□ 0.7
CMTM3-214ENST00000567572 VPS18Q9P253 973 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 PNMA2Q9UL42 364 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 RABGAP1Q9Y3P9 1069 aa19.45■□□□□ 0.7
CMTM3-214ENST00000567572 BZW2Q9Y6E2 419 aaKnown RBP19.45■□□□□ 0.7
CMTM3-214ENST00000567572 PAPPA2Q9BXP8 1791 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 POTEFA5A3E0 1075 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 ERICH4A6NGS2 130 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 CALUO43852 315 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-214ENST00000567572 POTEIP0CG38 1075 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 FDX1P10109 184 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 UBXN2AP68543 259 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 SUPT20HL1Q3ZLR7 823 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 ARSHQ5FYA8 562 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 POTEGQ6S5H5 508 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 POTEEQ6S8J3 1075 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 SPATA4Q8NEY3 305 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 METTL14Q9HCE5 456 aaKnown RBP19.44■□□□□ 0.7
CMTM3-214ENST00000567572 COL20A1Q9P218 1284 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 FBXL5Q9UKA1 691 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 HPCAL4Q9UM19 191 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 ZHX2Q9Y6X8 837 aa19.44■□□□□ 0.7
CMTM3-214ENST00000567572 PSMD10O75832 226 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 SETQ01105 290 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-214ENST00000567572 GIT2Q14161 759 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 KNOP1Q1ED39 458 aaKnown RBP19.43■□□□□ 0.7
CMTM3-214ENST00000567572 CCDC181Q5TID7 509 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 CPXCR1Q8N123 301 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 GOLGA5Q8TBA6 731 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 CCDC102AQ96A19 550 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 SYT17Q9BSW7 474 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 GANQ9H2C0 597 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 ADARB2Q9NS39 739 aaKnown RBP19.43■□□□□ 0.7
CMTM3-214ENST00000567572 MAP3K20Q9NYL2 800 aaKnown RBP19.43■□□□□ 0.7
CMTM3-214ENST00000567572 RNF181Q9P0P0 153 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 C19orf81C9J6K1 198 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 MEIS1O00470 390 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 VWA5AO00534 786 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 ZNF185O15231 689 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 TLR2O60603 784 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 ALAS1P13196 640 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 GAP43P17677 238 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 MUTP22033 750 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 POLR2FP61218 127 aaKnown RBP19.43■□□□□ 0.7
CMTM3-214ENST00000567572 GFPT1Q06210 699 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-214ENST00000567572 NAB2Q15742 525 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 SAMD3Q8N6K7 520 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.43■□□□□ 0.73e-6■■■■□ 21.3
CMTM3-214ENST00000567572 FGFBP2Q9BYJ0 223 aa19.43■□□□□ 0.7
CMTM3-214ENST00000567572 FRMPD4Q14CM0 1322 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 GRID2IPA4D2P6 1211 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 EML1O00423 815 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 ZBED4O75132 1171 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 RPS6KA5O75582 802 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 YBX3P16989 372 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■■□□□ 12.5
CMTM3-214ENST00000567572 NR2F2P24468 414 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 RPL13P26373 211 aaKnown RBP19.42■□□□□ 0.7
CMTM3-214ENST00000567572 PPP2R5CQ13362 524 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 LRCH2Q5VUJ6 765 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 OTOP1Q7RTM1 612 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 NELFCDQ8IXH7 590 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 AENQ8WTP8 325 aaKnown RBP19.42■□□□□ 0.7
CMTM3-214ENST00000567572 OLFML3Q9NRN5 406 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 CWC15Q9P013 229 aaKnown RBP19.42■□□□□ 0.7
CMTM3-214ENST00000567572 ARMCX3Q9UH62 379 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-214ENST00000567572 PCDHGC5Q9Y5F6 944 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 POLR2AP24928 1970 aaKnown RBP19.42■□□□□ 0.7
CMTM3-214ENST00000567572 WDR90Q96KV7 1748 aa19.42■□□□□ 0.7
CMTM3-214ENST00000567572 CES2O00748 559 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 TNNT3P45378 269 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-214ENST00000567572 HMGCS2P54868 508 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 C2orf54Q08AI8 447 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 ASIC2Q16515 512 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 NFIL3Q16649 462 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 CFAP221Q4G0U5 840 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 ATG4CQ96DT6 458 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 CRACR2AQ9BSW2 395 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 TLR10Q9BXR5 811 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 NLRC4Q9NPP4 1024 aa19.41■□□□□ 0.7
CMTM3-214ENST00000567572 TYW1Q9NV66 732 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms