RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CASTP20810 708 aaKnown RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 PLA2G4AP47712 749 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 RBM10P98175 930 aaKnown RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 ZNF200P98182 395 aaPredicted RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 MTX1Q13505 466 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 NCOA4Q13772 614 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 BAATQ14032 418 aaPredicted RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 BTG3Q14201 252 aaPredicted RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 TRIM71Q2Q1W2 868 aaKnown RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 C12orf60Q5U649 245 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 CWF19L1Q69YN2 538 aaKnown RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 CHST3Q7LGC8 479 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 DHX37Q8IY37 1157 aaKnown RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 LCORLQ8N3X6 602 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 MICAL1Q8TDZ2 1067 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 CHURC1Q8WUH1 139 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 RIN2Q8WYP3 895 aaPredicted RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 KAT2BQ92831 832 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 CLP1Q92989 425 aaKnown RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 CHMP4CQ96CF2 233 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 RTP3Q9BQQ7 232 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 GPR108Q9NPR9 543 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 ATP8A2Q9NTI2 1148 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 ASPMQ8IZT6 3477 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 CEP295Q9C0D2 2601 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 ADGRA3Q8IWK6 1321 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 ZZEF1O43149 2961 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 PTPDC1A2A3K4 754 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 C2CD4DB7Z1M9 353 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 PRKAB2O43741 272 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 ITGB1P05556 798 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 MMP3P08254 477 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 SRGAP2BP0DMP2 458 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 BMP3P12645 472 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 DNAJB1P25685 340 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 STAT2P52630 851 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 SMTNP53814 917 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 SNAP25P60880 206 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 SRSF11Q05519 484 aaKnown RBP6.29□□□□□ -1.4
HERC1-213ENST00000561359 GAS6Q14393 721 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 DGKDQ16760 1214 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 KIAA0753Q2KHM9 967 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 RPAP2Q8IXW5 612 aaPredicted RBP6.29□□□□□ -1.4
HERC1-213ENST00000561359 STK11IPQ8N1F8 1099 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 SPPL3Q8TCT6 385 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 POF1BQ8WVV4 589 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 MPHOSPH6Q99547 160 aaKnown RBP6.29□□□□□ -1.4
HERC1-213ENST00000561359 KATNAL1Q9BW62 490 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 NIFKQ9BYG3 293 aaKnown RBP6.29□□□□□ -1.4
HERC1-213ENST00000561359 CCDC8Q9H0W5 538 aaPredicted RBP6.29□□□□□ -1.4
HERC1-213ENST00000561359 RUBCNLQ9H714 662 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 ARMT1Q9H993 441 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 MKNK2Q9HBH9 465 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 SMC4Q9NTJ3 1288 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 TLR7Q9NYK1 1049 aaKnown RBP6.29□□□□□ -1.4
HERC1-213ENST00000561359 NCDNQ9UBB6 729 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 DBNLQ9UJU6 430 aaKnown RBP6.29□□□□□ -1.4
HERC1-213ENST00000561359 CCPG1Q9ULG6 757 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 FRYQ5TBA9 3013 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 MYO10Q9HD67 2058 aa6.29□□□□□ -1.4
HERC1-213ENST00000561359 ZNF532Q9HCE3 1301 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 LOC102724159A0A0B4J2E5 919 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 PNMA6EA0A0J9YXQ4 647 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 FSD2A1L4K1 749 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 PRR5-ARHGAP8B1AHC4 643 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 BACH1O14867 736 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 MBD4O95243 580 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 ARIH2O95376 493 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 CTSHP09668 335 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 ARP10275 920 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 MX2P20592 715 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 RFX1P22670 979 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 CALML3P27482 149 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 MSX1P28360 303 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 TECP42680 631 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 ARHGAP8P85298 464 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 PWP2Q15269 919 aaKnown RBP6.28□□□□□ -1.4
HERC1-213ENST00000561359 TTF1Q15361 905 aaPredicted RBP6.28□□□□□ -1.4
HERC1-213ENST00000561359 NAALADL2Q58DX5 795 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 EFHC2Q5JST6 749 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 SLFN13Q68D06 897 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 FAM160B2Q86V87 743 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 KLHL23Q8NBE8 558 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 VN1R2Q8NFZ6 395 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 ATP8B4Q8TF62 1192 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 STAG1Q8WVM7 1258 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 APBB2Q92870 758 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 P2RX5Q93086 422 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 RTKNQ9BST9 563 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 S1PR5Q9H228 398 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 FBXL21Q9UKT6 434 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 NAV1Q8NEY1 1877 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 MYO5AQ9Y4I1 1855 aaKnown RBP6.28□□□□□ -1.4
HERC1-213ENST00000561359 MAST4O15021 2626 aa6.28□□□□□ -1.4
HERC1-213ENST00000561359 CNOT1A5YKK6 2376 aaKnown RBP6.27□□□□□ -1.41
HERC1-213ENST00000561359 TMEM229AB2RXF0 380 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 B4DLN1 442 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 KINO60870 393 aaKnown RBP6.27□□□□□ -1.41
HERC1-213ENST00000561359 GH1P01241 217 aa6.27□□□□□ -1.41
HERC1-213ENST00000561359 ZNF286BP0CG31 522 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms