RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 ERMNQ8TAM6 284 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 DNAJB3Q8WWF6 145 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 VWCEQ96DN2 955 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 RAB34Q9BZG1 259 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 PRO3102Q9H379 93 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 TUFT1Q9NNX1 390 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 SEPT9Q9UHD8 586 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 LTBP2Q14767 1821 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 SMIM35A0A1B0GVV1 85 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 PP2D1A8MPX8 630 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 MAGEB2O15479 319 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 BMP8BP34820 402 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 DDIT3P35638 169 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 NASPP49321 788 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 NPEPPSP55786 919 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 GRIN1Q05586 938 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 FPGSQ05932 587 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 SLC39A14Q15043 492 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 ECM1Q16610 540 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 FOXD4L6Q3SYB3 417 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 MTERF2Q49AM1 385 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 PLA2G4FQ68DD2 849 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 EFCAB12Q6NXP0 572 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 FOXD4L3Q6VB84 417 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 LRRC8DQ7L1W4 858 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 OTUD6AQ7L8S5 288 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 KIAA0319LQ8IZA0 1049 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 ZNF396Q96N95 335 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 MMTAG2Q9BU76 263 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 FAM49AQ9H0Q0 323 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 CYP26B1Q9NR63 512 aa13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 DAXXQ9UER7 740 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-218ENST00000560777 IGKV6-21A0A0C4DH24 114 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 RSPH10B2B2RC85 870 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 CAND2O75155 1236 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 CHRNA1P02708 482 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 RSPH10BP0C881 870 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 MARCKSP29966 332 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 TBC1D8BQ0IIM8 1120 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 MBTPS1Q14703 1052 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 FAM26DQ5JW98 314 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 RSPH3Q86UC2 560 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 NME8Q8N427 588 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 METTL13Q8N6R0 699 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 LINC01465Q8N7H1 131 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 PIGOQ8TEQ8 1089 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 CEP170P1Q96L14 293 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 UBE2OQ9C0C9 1292 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 ANKEF1Q9NU02 776 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 COLQQ9Y215 455 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 MORC2Q9Y6X9 1032 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-218ENST00000560777 NBNO60934 754 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 MAFO75444 373 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 CTSHP09668 335 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 ACRP10323 421 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 MUTP22033 750 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 MGAT3Q09327 533 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 PPIGQ13427 754 aaKnown RBP eCLIP13.35□□□□□ -0.272e-7■■■□□ 16.8
RABGGTA-218ENST00000560777 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 XKR9Q5GH70 373 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 KRT79Q5XKE5 535 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 HAUS3Q68CZ6 603 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 LRRC71Q8N4P6 559 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 SNX29Q8TEQ0 813 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 AK8Q96MA6 479 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 NACC1Q96RE7 527 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 OSBPL7Q9BZF2 842 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 SUGCTQ9HAC7 445 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 IL23AQ9NPF7 189 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 FBXO2Q9UK22 296 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 KIAA1024Q9UPX6 916 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 EVPLQ92817 2033 aa13.35□□□□□ -0.27
RABGGTA-218ENST00000560777 PARNO95453 639 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 RPLP2P05387 115 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 RFC2P35250 354 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 LONP1P36776 959 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 ANP32AP39687 249 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 RARRES1P49788 294 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 CLCN3P51790 818 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 DNM1Q05193 864 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 TMEM62Q0P6H9 643 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 DRP2Q13474 957 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 TMEM240Q5SV17 173 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 IER5Q5VY09 327 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 DEFB128Q7Z7B8 93 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 CLIC6Q96NY7 704 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 CSRNP2Q9H175 543 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms