RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 TACC3Q9Y6A5 838 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 EPN1Q9Y6I3 576 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 DHX29Q7Z478 1369 aaKnown RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 NINLQ9Y2I6 1382 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 hCG_1642624A0A1W2PR95 340 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 DBX1A6NMT0 343 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 GSG1L2A8MUP6 293 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 F6X3S4 739 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 RASA4O43374 803 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZBTB14O43829 449 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 TSPAN3O60637 253 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 USO1O60763 962 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 DKC1O60832 514 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 DIAPH2O60879 1101 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 PHACTR2O75167 634 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 USP1O94782 785 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 FARP2O94887 1054 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 DDX58O95786 925 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 CYP11A1P05108 521 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 S100A6P06703 90 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 NFICP08651 508 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 RAB6AP20340 208 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 MUTP22033 750 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 PSMA4P25789 261 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 ADMP35318 185 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 EPS15P42566 896 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 TM4SF4P48230 202 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 RBM5P52756 815 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 GSCP56915 257 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 RBM6P78332 1123 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 GRSF1Q12849 480 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 NMIQ13287 307 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 SEMA3AQ14563 771 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 PPP1R7Q15435 360 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 OASLQ15646 514 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 INAQ16352 499 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 CCNG2Q16589 344 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 KIAA0753Q2KHM9 967 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 C15orf59Q2T9L4 293 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 MTERF2Q49AM1 385 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 SH2D4BQ5SQS7 431 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 FAM180BQ6P0A1 224 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 CNSTQ6PJW8 725 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 KDELC1Q6UW63 502 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 DSTYKQ6XUX3 929 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 NEK10Q6ZWH5 1172 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 DYMQ7RTS9 669 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 VN1R5Q7Z5H4 357 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 IQCA1Q86XH1 822 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 KSR1Q8IVT5 923 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 LRRC43Q8N309 656 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 TMEM57Q8N5G2 664 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 CCDC148Q8NFR7 591 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 MIPOL1Q8TD10 442 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 CCT6BQ92526 530 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 DPF3Q92784 378 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 GCC1Q96CN9 775 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 IPO9Q96P70 1041 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 SLC38A3Q99624 504 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZKSCAN3Q9BRR0 538 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 ADPGKQ9BRR6 497 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 HERC2P3Q9BVR0 1158 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 CAPS2Q9BXY5 557 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 RHOBTB2Q9BYZ6 727 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 STMN4Q9H169 189 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 ELAC1Q9H777 363 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 UPF2Q9HAU5 1272 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZCCHC17Q9NP64 241 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 PPP1R14DQ9NXH3 145 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 NSMCE4AQ9NXX6 385 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 TUBA8Q9NY65 449 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 SPATA7Q9P0W8 599 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZC3H7BQ9UGR2 993 aaKnown RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 RCAN3Q9UKA8 241 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 GRID1Q9ULK0 1009 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 TMEM98Q9Y2Y6 226 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 TMX2Q9Y320 296 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 CAB39Q9Y376 341 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 PCDHGB3Q9Y5G1 929 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 SNX8Q9Y5X2 465 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 PHLDB1Q86UU1 1377 aa5.02□□□□□ -1.61
HMGB3P26-201ENST00000560051 ATAD2BQ9ULI0 1458 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZNF804BA4D1E1 1349 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 LINC00854A0A1B0GVQ3 168 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ABHD14A-ACY1A0A1B0GW23 586 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 CLRN2A0PK11 232 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 MINDY4BA8MYZ0 360 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 KLHL41O60662 606 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 DDHD2O94830 711 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ABLIM3O94929 683 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 IFIT1P09914 478 aaKnown RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 USP17L7P0C7H9 530 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 HSPA1AP0DMV8 641 aaKnown RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 HSPA1BP0DMV9 641 aaKnown RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ESRRAP11474 423 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ADH5P11766 374 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 ZNF24P17028 368 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 TMOD1P28289 359 aa5.01□□□□□ -1.61
HMGB3P26-201ENST00000560051 PSMC4P43686 418 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms