RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 PRKD3O94806 890 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 PDGFRBP09619 1106 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 PTGS1P23219 599 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 NCKAP1LP55160 1127 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 ITGA1P56199 1179 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 FOXO4P98177 505 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 EXOSC10Q01780 885 aaKnown RBP4.61□□□□□ -1.67
SRP54-209ENST00000555746 PFKPQ01813 784 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 BRDTQ58F21 947 aaPredicted RBP4.61□□□□□ -1.67
SRP54-209ENST00000555746 IQSEC1Q6DN90 963 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 VASNQ6EMK4 673 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 LIPIQ6XZB0 460 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 LINC00482Q8N8I6 264 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 BHLHE22Q8NFJ8 381 aaPredicted RBP4.61□□□□□ -1.67
SRP54-209ENST00000555746 IGDCC4Q8TDY8 1250 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 KCNN1Q92952 543 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 E2F7Q96AV8 911 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 FAM84AQ96KN4 292 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 TMEM209Q96SK2 561 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 FOXB1Q99853 325 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 MENTQ9BUN1 341 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 ZDHHC5Q9C0B5 715 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 SETD1BQ9UPS6 1966 aaKnown RBP4.61□□□□□ -1.67
SRP54-209ENST00000555746 GRIN2BQ13224 1484 aa4.61□□□□□ -1.67
SRP54-209ENST00000555746 BCORL1Q5H9F3 1711 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 ETV2O00321 342 aaPredicted RBP4.6□□□□□ -1.67
SRP54-209ENST00000555746 MAFO75444 373 aaPredicted RBP4.6□□□□□ -1.67
SRP54-209ENST00000555746 FARP2O94887 1054 aaPredicted RBP4.6□□□□□ -1.67
SRP54-209ENST00000555746 KRT1P04264 644 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 HSP90B1P14625 803 aaKnown RBP4.6□□□□□ -1.67
SRP54-209ENST00000555746 MC4RP32245 332 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 ERVK-21P61565 698 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 HTRA3P83110 453 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 CAP1Q01518 475 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 ALDH6A1Q02252 535 aaKnown RBP4.6□□□□□ -1.67
SRP54-209ENST00000555746 ADAM9Q13443 819 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 MTMR1Q13613 665 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 FERMT3Q86UX7 667 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 CILP2Q8IUL8 1156 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 PHYKPLQ8IUZ5 450 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 TMEFF1Q8IYR6 380 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 CNTD1Q8N815 330 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 COG1Q8WTW3 980 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 MAML3Q96JK9 1138 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 SIGLEC10Q96LC7 697 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 WRNIP1Q96S55 665 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 GORASP1Q9BQQ3 440 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 C11orf84Q9BUA3 381 aaPredicted RBP4.6□□□□□ -1.67
SRP54-209ENST00000555746 AMNQ9BXJ7 453 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 TRIM8Q9BZR9 551 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 INCENPQ9NQS7 918 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 GALNT8Q9NY28 637 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 ARHGAP28Q9P2N2 729 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 RBPJLQ9UBG7 517 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 FAN1Q9Y2M0 1017 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 DNMBPQ6XZF7 1577 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 MADDQ8WXG6 1647 aa4.6□□□□□ -1.67
SRP54-209ENST00000555746 UBA6A0AVT1 1052 aaPredicted RBP4.59□□□□□ -1.67
SRP54-209ENST00000555746 PRAMEF22A3QJZ6 481 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 NFIBO00712 420 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 PRLP01236 227 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 MOGSQ13724 837 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 FAM50AQ14320 339 aaKnown RBP4.59□□□□□ -1.67
SRP54-209ENST00000555746 STILQ15468 1287 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 SKIDA1Q1XH10 827 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 INAVAQ3KP66 663 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 PLEKHG6Q3KR16 790 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 RGL3Q3MIN7 710 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 PRAMEF18Q5VWM3 479 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 TMC5Q6UXY8 1006 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 FRMD7Q6ZUT3 714 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 SYDE1Q6ZW31 735 aaPredicted RBP4.59□□□□□ -1.67
SRP54-209ENST00000555746 HDGFL2Q7Z4V5 671 aaPredicted RBP4.59□□□□□ -1.67
SRP54-209ENST00000555746 POU5F2Q8N7G0 328 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 TTLL6Q8N841 843 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 KYQ8NBH2 561 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 HIPK4Q8NE63 616 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 RTF1Q92541 710 aaKnown RBP4.59□□□□□ -1.67
SRP54-209ENST00000555746 NOX5Q96PH1 765 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 PPP1R16BQ96T49 567 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 BTBD2Q9BX70 525 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 ASPSCR1Q9BZE9 553 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 IRF2BPLQ9H1B7 796 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 VTA1Q9NP79 307 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 SLC39A2Q9NP94 309 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 UCKL1Q9NWZ5 548 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 MAP3K4Q9Y6R4 1608 aa4.59□□□□□ -1.67
SRP54-209ENST00000555746 CFAP43Q8NDM7 1665 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 KIAA0586Q9BVV6 1533 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 POLA1P09884 1462 aaPredicted RBP4.58□□□□□ -1.68
SRP54-209ENST00000555746 KATNA1O75449 491 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 IL18BPO95998 194 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 PLA2G1BP04054 148 aaKnown RBP4.58□□□□□ -1.68
SRP54-209ENST00000555746 CHGBP05060 677 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 HMGB1P09429 215 aaKnown RBP4.58□□□□□ -1.68
SRP54-209ENST00000555746 TMEM253P0C7T8 217 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 LIMS1P48059 325 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 TTC38Q5R3I4 469 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 PRR31Q5SQ13 230 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 SYDE2Q5VT97 1194 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms