RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 KLHL7Q8IXQ5 586 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 RPS6KC1Q96S38 1066 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 NOC4LQ9BVI4 516 aaKnown RBP17■□□□□ 0.31
SYNE3-203ENST00000554873 TRIM9Q9C026 710 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 UBE2OQ9C0C9 1292 aaKnown RBP17■□□□□ 0.31
SYNE3-203ENST00000554873 TFCP2L1Q9NZI6 479 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 ZNF232Q9UNY5 417 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 MYH10P35580 1976 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 FCER1AP12319 257 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 HEATR3Q7Z4Q2 680 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 C2CD5Q86YS7 1000 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 MIPOL1Q8TD10 442 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 MMADHCQ9H3L0 296 aaPredicted RBP17■□□□□ 0.31
SYNE3-203ENST00000554873 CCDC134Q9H6E4 229 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 ZWILCHQ9H900 591 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 DNAAF2Q9NVR5 837 aaKnown RBP17■□□□□ 0.31
SYNE3-203ENST00000554873 PNMA2Q9UL42 364 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 FLT1P17948 1338 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 ECEL1O95672 775 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 EIF3BP55884 814 aaKnown RBP16.99■□□□□ 0.31
SYNE3-203ENST00000554873 GRM4Q14833 912 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 TXNRD1Q16881 649 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 CCDC178Q5BJE1 867 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 ASRGL1Q7L266 308 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 CABP7Q86V35 215 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 ANKRD13CQ8N6S4 541 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 USP38Q8NB14 1042 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 DAGLBQ8NCG7 672 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 PHF24Q9UPV7 400 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 BICDL2A1A5D9 508 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 BUB1O43683 1085 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 BAG3O95817 575 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 ACBD5Q5T8D3 534 aaPredicted RBP16.99■□□□□ 0.31
SYNE3-203ENST00000554873 MYLK4Q86YV6 388 aaPredicted RBP16.99■□□□□ 0.31
SYNE3-203ENST00000554873 ZSCAN29Q8IWY8 852 aaPredicted RBP16.99■□□□□ 0.31
SYNE3-203ENST00000554873 DYNLL2Q96FJ2 89 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 FGD4Q96M96 766 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 ERGIC2Q96RQ1 377 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 CTNNAL1Q9UBT7 734 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 TMEM59LQ9UK28 342 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 JAG2Q9Y219 1238 aa16.99■□□□□ 0.31
SYNE3-203ENST00000554873 USP17L3A6NCW0 530 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 USP17L4A6NCW7 530 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 LAD1O00515 517 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 SNX3O60493 162 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 ACADSP16219 412 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 ANKS1AQ92625 1134 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 IFT43Q96FT9 208 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 NEUROG2Q9H2A3 272 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 BARHL2Q9NY43 387 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 BHMG1C9JSJ3 638 aaPredicted RBP16.98■□□□□ 0.31
SYNE3-203ENST00000554873 F8VZ95 297 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 ZPR1O75312 459 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
SYNE3-203ENST00000554873 PSMC4P43686 418 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 MMP13P45452 471 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 ASIC1P78348 528 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 MYBPC3Q14896 1274 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 RNF220Q5VTB9 566 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 CHADLQ6NUI6 762 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 HOOK3Q86VS8 718 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 FAM114A1Q8IWE2 563 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 HPS3Q969F9 1004 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 C7orf25Q9BPX7 421 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 SELENOSQ9BQE4 189 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 CUEDC2Q9H467 287 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 TCP11L1Q9NUJ3 509 aa16.98■□□□□ 0.31
SYNE3-203ENST00000554873 THRAP3Q9Y2W1 955 aaKnown RBP16.98■□□□□ 0.31
SYNE3-203ENST00000554873 CALB2P22676 271 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 RFC5P40937 340 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 PLS1Q14651 629 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 TMC3Q7Z5M5 1100 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 RNPEPL1Q9HAU8 725 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 DLGAP2Q9P1A6 1054 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 SCNN1BP51168 640 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 DNA2P51530 1060 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 RASSF7Q02833 373 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 DBN1Q16643 649 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 C12orf60Q5U649 245 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 OR52E8Q6IFG1 317 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 DDX42Q86XP3 938 aaKnown RBP eCLIP16.97■□□□□ 0.31
SYNE3-203ENST00000554873 RBM17Q96I25 401 aaKnown RBP16.97■□□□□ 0.31
SYNE3-203ENST00000554873 SEMA6BQ9H3T3 888 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 ZNF652Q9Y2D9 606 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 USP15Q9Y4E8 981 aaPredicted RBP16.97■□□□□ 0.31
SYNE3-203ENST00000554873 LAMB2P55268 1798 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 OAS1P00973 400 aaKnown RBP16.97■□□□□ 0.31
SYNE3-203ENST00000554873 FLT3P36888 993 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 PEX5P50542 639 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 PDE6CP51160 858 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 LMNB2Q03252 620 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 TSNAXIP1Q2TAA8 658 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 SESTD1Q86VW0 696 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 RAB3IPQ96QF0 476 aaPredicted RBP16.97■□□□□ 0.31
SYNE3-203ENST00000554873 MAGEF1Q9HAY2 307 aa16.97■□□□□ 0.31
SYNE3-203ENST00000554873 DMAP1Q9NPF5 467 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms