RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 H0Y858 1186 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 FOXP2O15409 715 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 B4GALT3O60512 393 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 KRT37O76014 449 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 SYN1P17600 705 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 CNGA1P29973 690 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 EVA1CP58658 441 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 ANAPC15P60006 121 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 TMEM132BQ14DG7 1078 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 STILQ15468 1287 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 CC2D1AQ6P1N0 951 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-213ENST00000554776 DPP8Q6V1X1 898 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-213ENST00000554776 Q6ZUG5 572 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 REXO1L1PQ8IX06 675 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 NXPE1Q8N323 547 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 KIAA1958Q8N8K9 716 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 SMC1BQ8NDV3 1235 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 AJUBAQ96IF1 538 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 AMNQ9BXJ7 453 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 KATNBL1Q9H079 304 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 BARX1Q9HBU1 254 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-213ENST00000554776 OXSMQ9NWU1 459 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 H2AFY2Q9P0M6 372 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-213ENST00000554776 INVSQ9Y283 1065 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 NOP58Q9Y2X3 529 aaKnown RBP4.37□□□□□ -1.71
SCFD1-213ENST00000554776 ASB1Q9Y576 335 aa4.37□□□□□ -1.71
SCFD1-213ENST00000554776 H7C1D1 291 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 GAS7O60861 476 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 BPIP17213 487 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 CSF2RBP32927 897 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 FNTBP49356 437 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 KIF11P52732 1056 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 IL13RA1P78552 427 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 DHCR24Q15392 516 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 ERICH6BQ5W0A0 696 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 ESRP1Q6NXG1 681 aaKnown RBP4.36□□□□□ -1.71
SCFD1-213ENST00000554776 CXXC5Q7LFL8 322 aaKnown RBP4.36□□□□□ -1.71
SCFD1-213ENST00000554776 PLEKHH3Q7Z736 793 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 RTN4RL1Q86UN2 441 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-213ENST00000554776 KBTBD2Q8IY47 623 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 RPUSD2Q8IZ73 545 aaKnown RBP4.36□□□□□ -1.71
SCFD1-213ENST00000554776 ZCRB1Q8TBF4 217 aaKnown RBP4.36□□□□□ -1.71
SCFD1-213ENST00000554776 CHTF18Q8WVB6 975 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 LEO1Q8WVC0 666 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-213ENST00000554776 GBP4Q96PP9 640 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 BTBD2Q9BX70 525 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 PCIF1Q9H4Z3 704 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 CAAP1Q9H8G2 361 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 UCKL1Q9NWZ5 548 aa4.36□□□□□ -1.71
SCFD1-213ENST00000554776 PRAMEF22A3QJZ6 481 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 GOLGA6L22H0YM25 854 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 CUTAO60888 179 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 RAB11FIP3O75154 756 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 PLATP00750 562 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 CDK11BP21127 795 aaKnown RBP4.35□□□□□ -1.71
SCFD1-213ENST00000554776 PTX3P26022 381 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-213ENST00000554776 POLD1P28340 1107 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 SOX5P35711 763 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 ADCYAP1R1P41586 468 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 ECE1P42892 770 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 TOP3AQ13472 1001 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-213ENST00000554776 SURF1Q15526 300 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 TBC1D10BQ4KMP7 808 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-213ENST00000554776 KANK2Q63ZY3 851 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 LRSAM1Q6UWE0 723 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 KRT26Q7Z3Y9 468 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 STRA8Q7Z7C7 330 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 AFAP1L2Q8N4X5 818 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 EFHBQ8N7U6 833 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 HIPK4Q8NE63 616 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 OR2W6PQ8NHA6 318 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 FOXRED1Q96CU9 486 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-213ENST00000554776 C16orf92Q96LL3 132 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 RBM15Q96T37 977 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCFD1-213ENST00000554776 ELF4Q99607 663 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-213ENST00000554776 BDH2Q9BUT1 245 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 OR10A5Q9H207 317 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 TMX1Q9H3N1 280 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.35□□□□□ -1.715e-6■■■□□ 17
SCFD1-213ENST00000554776 ACSS2Q9NR19 701 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 THG1LQ9NWX6 298 aaKnown RBP4.35□□□□□ -1.71
SCFD1-213ENST00000554776 CNOT11Q9UKZ1 510 aaKnown RBP4.35□□□□□ -1.71
SCFD1-213ENST00000554776 ZKSCAN5Q9Y2L8 839 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 SPO11Q9Y5K1 396 aa4.35□□□□□ -1.71
SCFD1-213ENST00000554776 B8ZZF3 427 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 PRRG2O14669 202 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 LAMTOR5O43504 91 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 TGM5O43548 720 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 ITGB3P05106 788 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 CELA3BP08861 270 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 SLC9A1P19634 815 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 POU3F3P20264 500 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-213ENST00000554776 ETV4P43268 484 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 LSSP48449 732 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 SCNN1BP51168 640 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 EPHB4P54760 987 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 ALDH6A1Q02252 535 aaKnown RBP4.34□□□□□ -1.71
SCFD1-213ENST00000554776 ZNF174Q15697 407 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 WDR72Q3MJ13 1102 aa4.34□□□□□ -1.71
SCFD1-213ENST00000554776 RALYLQ86SE5 291 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms