RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ARL2P36404 184 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 CTCFP49711 727 aaPredicted RBP7.55□□□□□ -1.2
LINC00517-202ENST00000554257 KCNB1Q14721 858 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 POSTNQ15063 836 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 KRT79Q5XKE5 535 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 FBXO46Q6PJ61 603 aaPredicted RBP7.55□□□□□ -1.2
LINC00517-202ENST00000554257 CCDC73Q6ZRK6 1079 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 ZC3H3Q8IXZ2 948 aaKnown RBP7.55□□□□□ -1.2
LINC00517-202ENST00000554257 DHX37Q8IY37 1157 aaKnown RBP7.55□□□□□ -1.2
LINC00517-202ENST00000554257 KIAA0895Q8NCT3 520 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 PIGOQ8TEQ8 1089 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 BSNDQ8WZ55 320 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 ERCC4Q92889 916 aaPredicted RBP7.55□□□□□ -1.2
LINC00517-202ENST00000554257 PLIN2Q99541 437 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 RAB34Q9BZG1 259 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 FAM13BQ9NYF5 915 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 MAN1B1Q9UKM7 699 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 PPME1Q9Y570 386 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 GTPBP6O43824 516 aaPredicted RBP7.55□□□□□ -1.2
LINC00517-202ENST00000554257 RHOBTB3O94955 611 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 EDN1P05305 212 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 CD44P16070 742 aaKnown RBP7.55□□□□□ -1.2
LINC00517-202ENST00000554257 SLC26A2P50443 739 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 BEX3Q00994 111 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 LRRC41Q15345 812 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 SKOR2Q2VWA4 1001 aaPredicted RBP7.55□□□□□ -1.2
LINC00517-202ENST00000554257 RRAGBQ5VZM2 374 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 TRAF7Q6Q0C0 670 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 TAS1R3Q7RTX0 852 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 IQUBQ8NA54 791 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 ATP8B4Q8TF62 1192 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00517-202ENST00000554257 KCND2Q9NZV8 630 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 KIAA1468Q9P260 1216 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 PHF24Q9UPV7 400 aa7.55□□□□□ -1.2
LINC00517-202ENST00000554257 ADGRA3Q8IWK6 1321 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 RSPH10B2B2RC85 870 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 MAFO75444 373 aaPredicted RBP7.54□□□□□ -1.2
LINC00517-202ENST00000554257 RSPH10BP0C881 870 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 SNX17Q15036 470 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 FSCN1Q16658 493 aaKnown RBP7.54□□□□□ -1.2
LINC00517-202ENST00000554257 TRIM71Q2Q1W2 868 aaKnown RBP7.54□□□□□ -1.2
LINC00517-202ENST00000554257 GLIS3Q8NEA6 775 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 BBXQ8WY36 941 aaPredicted RBP7.54□□□□□ -1.2
LINC00517-202ENST00000554257 REEP2Q9BRK0 252 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 PYM1Q9BRP8 204 aaKnown RBP7.54□□□□□ -1.2
LINC00517-202ENST00000554257 CYP26B1Q9NR63 512 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 TDRD15B5MCY1 1934 aaKnown RBP7.54□□□□□ -1.2
LINC00517-202ENST00000554257 RBAK-RBAKDNI3L0D1 243 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 UBA7P41226 1012 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 CDK7P50613 346 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 STAT5BP51692 787 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 NPEPPSP55786 919 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 DRP2Q13474 957 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 CAVIN1Q6NZI2 390 aaKnown RBP7.54□□□□□ -1.2
LINC00517-202ENST00000554257 PDILTQ8N807 584 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 RAET1EQ8TD07 263 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 DDX12PQ92771 950 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 WNT8BQ93098 351 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 ZBTB10Q96DT7 871 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 NACC1Q96RE7 527 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 TSEN34Q9BSV6 310 aaKnown RBP7.54□□□□□ -1.2
LINC00517-202ENST00000554257 PANK2Q9BZ23 570 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 CCDC113Q9H0I3 377 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 PPP1R3GB7ZBB8 358 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 STAT6P42226 847 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 CASP5P51878 434 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 NCKAP1LP55160 1127 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 RTP1P59025 263 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 DGKDQ16760 1214 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 BMT2Q1RMZ1 405 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 XKR3Q5GH77 459 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 CDCA2Q69YH5 1023 aaPredicted RBP7.54□□□□□ -1.2
LINC00517-202ENST00000554257 GAS2L3Q86XJ1 694 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 TPH2Q8IWU9 490 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 ERMNQ8TAM6 284 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 STAMQ92783 540 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 BHMT2Q9H2M3 363 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 ST6GALNAC4Q9H4F1 302 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 SMARCAD1Q9H4L7 1026 aa7.54□□□□□ -1.2
LINC00517-202ENST00000554257 PGK1P00558 417 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 CCL5P13501 91 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 CPT1AP50416 773 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 MGAT3Q09327 533 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 PKN2Q16513 984 aaKnown RBP7.53□□□□□ -1.2
LINC00517-202ENST00000554257 KMT5BQ4FZB7 885 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 ZCWPW2Q504Y3 356 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 VWCEQ96DN2 955 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 NTPCRQ9BSD7 190 aaKnown RBP7.53□□□□□ -1.2
LINC00517-202ENST00000554257 BLZF1Q9H2G9 400 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 MLXIPQ9HAP2 919 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 PVALEFA0A1B0GWK0 134 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 DYNC1LI2O43237 492 aaPredicted RBP7.53□□□□□ -1.2
LINC00517-202ENST00000554257 UNC13DQ70J99 1090 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 RPAINQ86UA6 219 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 IFNLR1Q8IU57 520 aaPredicted RBP7.53□□□□□ -1.2
LINC00517-202ENST00000554257 DHX38Q92620 1227 aaKnown RBP7.53□□□□□ -1.2
LINC00517-202ENST00000554257 ATP6V0A1Q93050 837 aa7.53□□□□□ -1.2
LINC00517-202ENST00000554257 CALML4Q96GE6 196 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms