RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 AFG3L2Q9Y4W6 797 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 hCG_1984214I3L0E3 225 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 CCND1P24385 295 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 PTGISQ16647 500 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 C1orf146Q5VVC0 180 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 ZNF713Q8N859 430 aaPredicted RBP16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 POMGNT1Q8WZA1 660 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 TTC17Q96AE7 1141 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 SDCCAG3Q96C92 435 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 DCTN4Q9UJW0 460 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 BCS1LQ9Y276 419 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 H3BQF6 201 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 RCAN1P53805 252 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 CAV1Q03135 178 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 ZNF211Q13398 564 aaPredicted RBP16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 RBM43Q6ZSC3 357 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 RFX6Q8HWS3 928 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 XPO6Q96QU8 1125 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 TEKT3Q9BXF9 490 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 USP40Q9NVE5 1235 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 GGT7Q9UJ14 662 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 ANKARQ7Z5J8 1434 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 NEDD4P46934 1319 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 CYP2D7A0A087X1C5 515 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 MXI1P50539 228 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 MFSD14BQ5SR56 506 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 RINT1Q6NUQ1 792 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 USP42Q9H9J4 1324 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 GYPCP04921 128 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 SIK1P57059 783 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 TCP10Q12799 353 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 KCNH2Q12809 1159 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 GPATCH4Q5T3I0 446 aaKnown RBP16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 NLRX1Q86UT6 975 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 CRLF3Q8IUI8 442 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 SPATA31A3Q5VYP0 1347 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 MEIS1O00470 390 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 CPP00450 1065 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 NCF2P19878 526 aaPredicted RBP16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 MCAMP43121 646 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 PIGBQ92521 554 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 MS4A14Q96JA4 679 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 RNPC3Q96LT9 517 aaKnown RBP16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 TTC1Q99614 292 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 IL25Q9H293 177 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 SH3GLB2Q9NR46 395 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 DNAJC12Q9UKB3 198 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 TCP11X1B4DZS4 312 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 SAT1P21673 171 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 NDE1Q9NXR1 346 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 AGTP01019 485 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 CHN1P15882 459 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 HSPA9P38646 679 aaKnown RBP16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 TMPRSS15P98073 1019 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 MDM2Q00987 491 aaPredicted RBP16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 CRYMQ14894 314 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 USPL1Q5W0Q7 1092 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 PDXDC1Q6P996 788 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 CYB5D1Q6P9G0 228 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 SGMS1Q86VZ5 419 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 MMGT1Q8N4V1 131 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 MTA3Q9BTC8 594 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 MXD3Q9BW11 206 aa16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 RBM12Q9NTZ6 932 aaKnown RBP16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 USP15Q9Y4E8 981 aaPredicted RBP16.97■□□□□ 0.31
RBFOX1-212ENST00000550418 MCF2LO15068 1137 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 P4HA1P13674 534 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 SATB1Q01826 763 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 RNF207Q6ZRF8 634 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 TRPM8Q7Z2W7 1104 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 WDR75Q8IWA0 830 aaKnown RBP16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 GINM1Q9NU53 330 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 PCDHB4Q9Y5E5 795 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 H0YCG3 227 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 H7C1W4 665 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 CARSP49589 748 aaKnown RBP16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 AP2B1P63010 937 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 DMP1Q13316 513 aaPredicted RBP16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 AGBL2Q5U5Z8 902 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 JADE1Q6IE81 842 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 TRIM50Q86XT4 487 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 TEX2Q8IWB9 1127 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 GUF1Q8N442 669 aaKnown RBP16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 CHURC1Q8WUH1 139 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 COA7Q96BR5 231 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 FAM161BQ96MY7 647 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 MIS12Q9H081 205 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 MRPL46Q9H2W6 279 aaKnown RBP16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 CCT8L1PA6NM43 557 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 CFLARO15519 480 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 SEPT12Q8IYM1 358 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 PRMT1Q99873 361 aaKnown RBP16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 PCIF1Q9H4Z3 704 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 ADGRL3Q9HAR2 1447 aa16.96■□□□□ 0.31
RBFOX1-212ENST00000550418 GSTA1P08263 222 aa16.96■□□□□ 0.3
RBFOX1-212ENST00000550418 GSTA2P09210 222 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms