RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 NGRNQ9NPE2 291 aaKnown RBP7.92□□□□□ -1.14
LIN7A-202ENST00000549417 SPATA6Q9NWH7 488 aaPredicted RBP7.92□□□□□ -1.14
LIN7A-202ENST00000549417 WNT16Q9UBV4 365 aa7.92□□□□□ -1.14
LIN7A-202ENST00000549417 PUF60Q9UHX1 559 aaKnown RBP7.92□□□□□ -1.14
LIN7A-202ENST00000549417 PADI3Q9ULW8 664 aa7.92□□□□□ -1.14
LIN7A-202ENST00000549417 C2orf16Q68DN1 1984 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 DSPP15924 2871 aaKnown RBP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 C1QTNF9BB2RNN3 333 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 SLC30A4O14863 429 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 SPTLC1O15269 473 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 PROS1P07225 676 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 C1QTNF9P0C862 333 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 HSPD1P10809 573 aaKnown RBP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 GNAT2P19087 354 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 MARK3P27448 753 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 HOXA13P31271 388 aaPredicted RBP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 IGBP1P78318 339 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 MRPS6P82932 125 aaKnown RBP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 ZNF543Q08ER8 600 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 PAK2Q13177 524 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 SMC1AQ14683 1233 aaKnown RBP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 CDC37Q16543 378 aaPredicted RBP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 RRP12Q5JTH9 1297 aaKnown RBP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 N4BP2L1Q5TBK1 243 aaPredicted RBP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 OTOP3Q7RTS5 596 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 GPR152Q8TDT2 470 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 AUTS2Q8WXX7 1259 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 SPOCK2Q92563 424 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 APPBP2Q92624 585 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 KIF1BPQ96EK5 621 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 GPR20Q99678 358 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 USP26Q9BXU7 913 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 FTHL17Q9BXU8 183 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 TOMM22Q9NS69 142 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 TUBE1Q9UJT0 475 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 PNMA2Q9UL42 364 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 ZNF215Q9UL58 517 aaPredicted RBP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 LZTS1Q9Y250 596 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.91□□□□□ -1.14
LIN7A-202ENST00000549417 MYH6P13533 1939 aa7.91□□□□□ -1.14
LIN7A-202ENST00000549417 LAMA5O15230 3695 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 CEP295Q9C0D2 2601 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 MIA3Q5JRA6 1907 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 ABCB11O95342 1321 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 NRCAMQ92823 1304 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 RNF113AO15541 343 aaKnown RBP7.9□□□□□ -1.14
LIN7A-202ENST00000549417 ANP32CO43423 234 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 LAMTOR5O43504 91 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 GDF9O60383 454 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 N4BP1O75113 896 aaKnown RBP7.9□□□□□ -1.14
LIN7A-202ENST00000549417 TOP1P11387 765 aaKnown RBP7.9□□□□□ -1.14
LIN7A-202ENST00000549417 LAG3P18627 525 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 PDE4AP27815 886 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 PMLP29590 882 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 SARSP49591 514 aaKnown RBP7.9□□□□□ -1.14
LIN7A-202ENST00000549417 PLCB3Q01970 1234 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 NFX1Q12986 1120 aaKnown RBP7.9□□□□□ -1.14
LIN7A-202ENST00000549417 PPFIA1Q13136 1202 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 GRIK4Q16099 956 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 HSP90AB4PQ58FF6 505 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 TAF2Q6P1X5 1199 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 KCNV1Q6PIU1 500 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 TSSK4Q6SA08 328 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 LRRC55Q6ZSA7 311 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 CCDC149Q6ZUS6 474 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 CABP7Q86V35 215 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 MCF2L2Q86YR7 1114 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 MRPL43Q8N983 215 aaKnown RBP7.9□□□□□ -1.14
LIN7A-202ENST00000549417 TMEM87AQ8NBN3 555 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 PJA1Q8NG27 643 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 NETO1Q8TDF5 533 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 PDCD2LQ9BRP1 358 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 NACAP1Q9BZK3 213 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 ARHGEF3Q9NR81 526 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 GMEB2Q9UKD1 530 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 DMXL2Q8TDJ6 3036 aa7.9□□□□□ -1.14
LIN7A-202ENST00000549417 LAMA1P25391 3075 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.89□□□□□ -1.15
LIN7A-202ENST00000549417 DENND3A2RUS2 1198 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 ZNF316A6NFI3 1004 aaPredicted RBP7.89□□□□□ -1.15
LIN7A-202ENST00000549417 CXCL14O95715 111 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 RLBP1P12271 317 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 GBP2P32456 591 aaPredicted RBP7.89□□□□□ -1.15
LIN7A-202ENST00000549417 NOVP48745 357 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 KRT17Q04695 432 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 PGM5Q15124 567 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 QRICH1Q2TAL8 776 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 MARCH8Q5T0T0 291 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 ZKSCAN2Q63HK3 967 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 TSHZ3Q63HK5 1081 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 PHLDB3Q6NSJ2 640 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 DCLRE1AQ6PJP8 1040 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 KCNT2Q6UVM3 1135 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 FTSJ3Q8IY81 847 aaKnown RBP7.89□□□□□ -1.15
LIN7A-202ENST00000549417 SLC44A3Q8N4M1 653 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 ADAM2Q99965 735 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 EPC1Q9H2F5 836 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 VAT1LQ9HCJ6 419 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 DZANK1Q9NVP4 752 aa7.89□□□□□ -1.15
LIN7A-202ENST00000549417 GINS2Q9Y248 185 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms