RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 LRMPQ12912 555 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 MAPK7Q13164 816 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 EDRF1Q3B7T1 1238 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 KCNV1Q6PIU1 500 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 RASAL3Q86YV0 1011 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 ABRAQ8N0Z2 381 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 ZNF507Q8TCN5 953 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 CEP63Q96MT8 703 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 PORCNQ9H237 461 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 ZCCHC17Q9NP64 241 aaKnown RBP10.31□□□□□ -0.76
GNE-206ENST00000543356 ZNFX1Q9P2E3 1918 aaKnown RBP10.31□□□□□ -0.76
GNE-206ENST00000543356 MAPTP10636 758 aaKnown RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 UBA1P22314 1058 aaKnown RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 SFPQP23246 707 aaKnown RBP eCLIP10.3□□□□□ -0.76
GNE-206ENST00000543356 CASP5P51878 434 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 CCZ1BP86790 482 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 CCZ1P86791 482 aaPredicted RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 FKBP3Q00688 224 aaKnown RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 ARID5BQ14865 1188 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 DNTTIP2Q5QJE6 756 aaKnown RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 SEPT14Q6ZU15 432 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 KIAA1524Q8TCG1 905 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 CCDC43Q96MW1 224 aaKnown RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 VPS16Q9H269 839 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 MRPL44Q9H9J2 332 aaKnown RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 CGNQ9P2M7 1197 aaKnown RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 GABBR1Q9UBS5 961 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 PYCARDQ9ULZ3 195 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 TRAF3IP3Q9Y228 551 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 BACH1O14867 736 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 HIP1RO75146 1068 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 STBD1O95210 358 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 MYBP10242 640 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 NEDD9Q14511 834 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 KNOP1Q1ED39 458 aaKnown RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 STXBP4Q6ZWJ1 553 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 OTUD6AQ7L8S5 288 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 MYCT1Q8N699 235 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 ANKRD13CQ8N6S4 541 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 ZNF526Q8TF50 670 aaPredicted RBP10.3□□□□□ -0.76
GNE-206ENST00000543356 FIZ1Q96SL8 496 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 PTPN18Q99952 460 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 TUBGCP2Q9BSJ2 902 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 EFCC1Q9HA90 598 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 SYNGAP1Q96PV0 1343 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 MYH11P35749 1972 aa10.3□□□□□ -0.76
GNE-206ENST00000543356 A0A1W2PQC6 194 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 ASB14A6NK59 587 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 PDXKO00764 312 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 FARP2O94887 1054 aaPredicted RBP10.29□□□□□ -0.76
GNE-206ENST00000543356 GCNT3O95395 438 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 GNA14O95837 355 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 CBX1P83916 185 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 FAM110CQ1W6H9 321 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 WDR78Q5VTH9 848 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 CYFIP1Q7L576 1253 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 CCDC60Q8IWA6 550 aaPredicted RBP10.29□□□□□ -0.76
GNE-206ENST00000543356 NELFCDQ8IXH7 590 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 DAW1Q8N136 415 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 CCDC112Q8NEF3 446 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 BCAS3Q9H6U6 928 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 TYW1Q9NV66 732 aaKnown RBP10.29□□□□□ -0.76
GNE-206ENST00000543356 ADGRA2Q96PE1 1338 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 PASKQ96RG2 1323 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 ZMYM2Q9UBW7 1377 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 IGKV6D-21A0A0A0MT36 114 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 MANSC4A6NHS7 340 aaPredicted RBP10.29□□□□□ -0.76
GNE-206ENST00000543356 DYNC1I1O14576 645 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 STRNO43815 780 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 NRDCO43847 1150 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 CALUO43852 315 aaPredicted RBP10.29□□□□□ -0.76
GNE-206ENST00000543356 ZNF862O60290 1169 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 HOXD13P35453 343 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 MTIF2P46199 727 aaKnown RBP10.29□□□□□ -0.76
GNE-206ENST00000543356 DNM2P50570 870 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 MARSP56192 900 aaKnown RBP10.29□□□□□ -0.76
GNE-206ENST00000543356 IRX5P78411 483 aaPredicted RBP10.29□□□□□ -0.76
GNE-206ENST00000543356 ALCAMQ13740 583 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 TRIM14Q14142 442 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 NFIL3Q16649 462 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 ZNF792Q3KQV3 632 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 XKR9Q5GH70 373 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 SWSAP1Q6NVH7 229 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 ANO5Q75V66 913 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 ZNF467Q7Z7K2 595 aaPredicted RBP10.29□□□□□ -0.76
GNE-206ENST00000543356 FAM178BQ8IXR5 827 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 DRC1Q96MC2 740 aa10.29□□□□□ -0.76
GNE-206ENST00000543356 USO1O60763 962 aaKnown RBP10.28□□□□□ -0.76
GNE-206ENST00000543356 PPP1R37O75864 691 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 KCNJ6P48051 423 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 PRKCEQ02156 737 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 UBXN1Q04323 297 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 PTPN21Q16825 1174 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 ODR4Q5SWX8 454 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 PLA2G4FQ68DD2 849 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 METTL7BQ6UX53 244 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 ZNF720Q7Z2F6 126 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 STRA6Q9BX79 667 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 SPTLC3Q9NUV7 552 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 LARSQ9P2J5 1176 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms