RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 UBE3AQ05086 875 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 ARHGAP1Q07960 439 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 HSDL1Q3SXM5 330 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 TMC5Q6UXY8 1006 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 ARMCX6Q7L4S7 300 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 ADSSL1Q8N142 457 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 SLC43A3Q8NBI5 491 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.55□□□□□ -1.04
GNE-205ENST00000539815 EPB41L4AQ9HCS5 686 aaPredicted RBP8.55□□□□□ -1.04
GNE-205ENST00000539815 DZANK1Q9NVP4 752 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 MYBP10242 640 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 INSRRP14616 1297 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 SFPQP23246 707 aaKnown RBP eCLIP8.55□□□□□ -1.04
GNE-205ENST00000539815 ZP2Q05996 745 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 CMTR2Q8IYT2 770 aaKnown RBP8.55□□□□□ -1.04
GNE-205ENST00000539815 LRRC43Q8N309 656 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 APOL6Q9BWW8 343 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 MAF1Q9H063 256 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 BRMS1Q9HCU9 246 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 DOCK1Q14185 1865 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 DPYSL4O14531 572 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 CHMP2AO43633 222 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 NBNO60934 754 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 CDC42EP1Q00587 391 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 GIT2Q14161 759 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 PRR23BQ6ZRT6 265 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 SERINC5Q86VE9 423 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 TBC1D5Q92609 795 aa8.55□□□□□ -1.04
GNE-205ENST00000539815 MYH13Q9UKX3 1938 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 DDX60LQ5H9U9 1706 aaKnown RBP8.54□□□□□ -1.04
GNE-205ENST00000539815 FGF18O76093 207 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 ADCY7P51828 1080 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 ITIH3Q06033 890 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 SMAD2Q15796 467 aaKnown RBP8.54□□□□□ -1.04
GNE-205ENST00000539815 SLC24A5Q71RS6 500 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 C12orf50Q8NA57 414 aaPredicted RBP8.54□□□□□ -1.04
GNE-205ENST00000539815 CELF4Q9BZC1 486 aaKnown RBP8.54□□□□□ -1.04
GNE-205ENST00000539815 PADI3Q9ULW8 664 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 ASTN1O14525 1302 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 PSAPP07602 524 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 GNA11P29992 359 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 MCM5P33992 734 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 TERF1P54274 439 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 BTNL9Q6UXG8 535 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 NME8Q8N427 588 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 P2RX5Q93086 422 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 FAM227BQ96M60 508 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 C22orf23Q9BZE7 217 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 ZNF302Q9NR11 478 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 PLAGL2Q9UPG8 496 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 ROBO3Q96MS0 1386 aa8.54□□□□□ -1.04
GNE-205ENST00000539815 POU3F3P20264 500 aaPredicted RBP8.53□□□□□ -1.04
GNE-205ENST00000539815 ALX1Q15699 326 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 VSIG10LQ86VR7 867 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 KIAA2013Q8IYS2 634 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 ELMOD1Q8N336 334 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 BICD2Q8TD16 824 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 TMEM117Q9H0C3 514 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 SEMA4AQ9H3S1 761 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 MRPL17Q9NRX2 175 aaKnown RBP8.53□□□□□ -1.04
GNE-205ENST00000539815 SPATA6Q9NWH7 488 aaPredicted RBP8.53□□□□□ -1.04
GNE-205ENST00000539815 PRG3Q9Y2Y8 225 aaPredicted RBP8.53□□□□□ -1.04
GNE-205ENST00000539815 GOLGA8AA7E2F4 631 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 GOLGA8BA8MQT2 603 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 DYNC1I1O14576 645 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 ALDH2P05091 517 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 ADH1AP07327 375 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 KLRC1P26715 233 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 ZXDAP98168 799 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 PUM1Q14671 1186 aaKnown RBP eCLIP8.53□□□□□ -1.04
GNE-205ENST00000539815 LONRF3Q496Y0 759 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 PLEKHG4Q58EX7 1191 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 EFHBQ8N7U6 833 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 LMBR1Q8WVP7 490 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 SMG7Q92540 1137 aaKnown RBP8.53□□□□□ -1.04
GNE-205ENST00000539815 GPRASP2Q96D09 838 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 FAN1Q9Y2M0 1017 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 GRIN2DO15399 1336 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 ENPP3O14638 875 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 GAS7O60861 476 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 BAG4O95429 457 aaKnown RBP8.53□□□□□ -1.04
GNE-205ENST00000539815 LMNAP02545 664 aaKnown RBP8.53□□□□□ -1.04
GNE-205ENST00000539815 CCDC172P0C7W6 258 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 MATR3P43243 847 aaKnown RBP eCLIP8.53□□□□□ -1.04
GNE-205ENST00000539815 SLC26A2P50443 739 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 PDE1AP54750 535 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 KIZQ2M2Z5 673 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 USP17L6PQ6QN14 398 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 GLYCTKQ8IVS8 523 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 CCDC148Q8NFR7 591 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 EXOC4Q96A65 974 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 MYCBPQ99417 103 aaPredicted RBP8.53□□□□□ -1.04
GNE-205ENST00000539815 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 PIN4Q9Y237 131 aaKnown RBP8.53□□□□□ -1.04
GNE-205ENST00000539815 ZSWIM8A7E2V4 1837 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 DOCK2Q92608 1830 aa8.53□□□□□ -1.04
GNE-205ENST00000539815 ARIH2O95376 493 aa8.52□□□□□ -1.04
GNE-205ENST00000539815 OR1G1P47890 313 aa8.52□□□□□ -1.04
GNE-205ENST00000539815 NLRP11P59045 1033 aaKnown RBP8.52□□□□□ -1.04
GNE-205ENST00000539815 NLRP5P59047 1200 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms