RNA–Protein interactions for RNA: ENST00000535106.5

VPS45-211, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-211ENST00000535106 SREBF1P36956 1147 aa13.2□□□□□ -0.3
VPS45-211ENST00000535106 GNGT1P63211 74 aa13.2□□□□□ -0.3
VPS45-211ENST00000535106 NNTQ13423 1086 aa13.2□□□□□ -0.3
VPS45-211ENST00000535106 DCAF8Q5TAQ9 597 aa13.2□□□□□ -0.3
VPS45-211ENST00000535106 ALKBH5Q6P6C2 394 aaKnown RBP13.2□□□□□ -0.3
VPS45-211ENST00000535106 ERMNQ8TAM6 284 aa13.2□□□□□ -0.3
VPS45-211ENST00000535106 SLC35C1Q96A29 364 aa13.2□□□□□ -0.3
VPS45-211ENST00000535106 FAM170AA1A519 330 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 SLC26A4O43511 780 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 KIF4AO95239 1232 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 ZBTB48P10074 688 aaPredicted RBP13.19□□□□□ -0.3
VPS45-211ENST00000535106 CCT5P48643 541 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 RBM5P52756 815 aaKnown RBP eCLIP13.19□□□□□ -0.3
VPS45-211ENST00000535106 GSCP56915 257 aaPredicted RBP13.19□□□□□ -0.3
VPS45-211ENST00000535106 IKQ13123 557 aaPredicted RBP13.19□□□□□ -0.3
VPS45-211ENST00000535106 RPS6KA1Q15418 735 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 FBXO11Q86XK2 927 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 SUGP1Q8IWZ8 645 aaKnown RBP13.19□□□□□ -0.3
VPS45-211ENST00000535106 DHX37Q8IY37 1157 aaKnown RBP13.19□□□□□ -0.3
VPS45-211ENST00000535106 PIGOQ8TEQ8 1089 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 PI4KBQ9UBF8 816 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 SIPA1L1O43166 1804 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 SPDYE3A6NKU9 549 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 BTNL10A8MVZ5 291 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 CLGNO14967 610 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 TBX3O15119 743 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 TGFB1I1O43294 461 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 GCNT3O95395 438 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 PAK2Q13177 524 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 RRP1BQ14684 758 aaKnown RBP13.19□□□□□ -0.3
VPS45-211ENST00000535106 TATDN1Q6P1N9 297 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 RUFY1Q96T51 708 aa13.19□□□□□ -0.3
VPS45-211ENST00000535106 EIF2AK1Q9BQI3 630 aaKnown RBP13.19□□□□□ -0.3
VPS45-211ENST00000535106 EIF3HO15372 352 aaKnown RBP eCLIP13.18□□□□□ -0.3
VPS45-211ENST00000535106 CALUO43852 315 aaPredicted RBP13.18□□□□□ -0.3
VPS45-211ENST00000535106 ATP1A2P50993 1020 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 JAM2P57087 298 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 CTTNQ14247 550 aaKnown RBP13.18□□□□□ -0.3
VPS45-211ENST00000535106 KCNV1Q6PIU1 500 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 CCDC91Q7Z6B0 441 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 SPICE1Q8N0Z3 855 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 AP1M1Q9BXS5 423 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 TYW1Q9NV66 732 aaKnown RBP13.18□□□□□ -0.3
VPS45-211ENST00000535106 SUFUQ9UMX1 484 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 NENFQ9UMX5 172 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 DDX3XO00571 662 aaKnown RBP eCLIP13.18□□□□□ -0.3
VPS45-211ENST00000535106 CEP104O60308 925 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
VPS45-211ENST00000535106 PDCLQ13371 301 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 BMT2Q1RMZ1 405 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 ZC2HC1CQ53FD0 456 aaPredicted RBP13.18□□□□□ -0.3
VPS45-211ENST00000535106 CFAP58Q5T655 872 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 SYDE2Q5VT97 1194 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 RINT1Q6NUQ1 792 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 DDX42Q86XP3 938 aaKnown RBP eCLIP13.18□□□□□ -0.3
VPS45-211ENST00000535106 TPCN2Q8NHX9 752 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 OLIG1Q8TAK6 271 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 BCAS4Q8TDM0 211 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 TAF4BQ92750 862 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 BORCS6Q96GS4 357 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 GCNT4Q9P109 453 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
VPS45-211ENST00000535106 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 ONECUT3O60422 494 aaPredicted RBP13.17□□□□□ -0.3
VPS45-211ENST00000535106 NPR1P16066 1061 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 ECHS1P30084 290 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 CIITAP33076 1130 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 PRKCIP41743 596 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 COG2Q14746 738 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 GBP6Q6ZN66 633 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 METTL13Q8N6R0 699 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 SCFD2Q8WU76 684 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 FAM20AQ96MK3 541 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 RABGAP1Q9Y3P9 1069 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 CPP00450 1065 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 MNAT1P51948 309 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 SKOR1P84550 965 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 C10orf76Q5T2E6 689 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 SWT1Q5T5J6 900 aaKnown RBP13.17□□□□□ -0.3
VPS45-211ENST00000535106 TMEM179Q6ZVK1 233 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 EFCAB13Q8IY85 973 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 MREGQ8N565 214 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 IDI2Q9BXS1 227 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
VPS45-211ENST00000535106 ANKRD31Q8N7Z5 1873 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 ZMYM2Q9UBW7 1377 aa13.17□□□□□ -0.3
VPS45-211ENST00000535106 IGLV3-22A0A075B6J6 115 aa13.16□□□□□ -0.3
VPS45-211ENST00000535106 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
VPS45-211ENST00000535106 GFPT2O94808 682 aa13.16□□□□□ -0.3
VPS45-211ENST00000535106 TRIM37O94972 964 aa13.16□□□□□ -0.3
VPS45-211ENST00000535106 EYA4O95677 639 aa13.16□□□□□ -0.3
VPS45-211ENST00000535106 GH2P01242 217 aa13.16□□□□□ -0.3
VPS45-211ENST00000535106 ITGA4P13612 1032 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms