RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 ZNF689Q96CS4 500 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-204ENST00000529288 TMX1Q9H3N1 280 aa14.73□□□□□ -0.05
CPSF1-204ENST00000529288 PCDHB7Q9Y5E2 793 aa14.73□□□□□ -0.05
CPSF1-204ENST00000529288 C5orf67F2Z3F1 127 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 CHMP2AO43633 222 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 VTNP04004 478 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 SSRP1Q08945 709 aaKnown RBP14.72□□□□□ -0.05
CPSF1-204ENST00000529288 STK3Q13188 491 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 ZNF746Q6NUN9 644 aaPredicted RBP14.72□□□□□ -0.05
CPSF1-204ENST00000529288 TRIM22Q8IYM9 498 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 CMTR2Q8IYT2 770 aaKnown RBP14.72□□□□□ -0.05
CPSF1-204ENST00000529288 GJD3Q8N144 294 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 CRYGNQ8WXF5 182 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 BBXQ8WY36 941 aaPredicted RBP14.72□□□□□ -0.05
CPSF1-204ENST00000529288 KHSRPQ92945 711 aaKnown RBP eCLIP14.72□□□□□ -0.05
CPSF1-204ENST00000529288 PABPC5Q96DU9 382 aaKnown RBP14.72□□□□□ -0.05
CPSF1-204ENST00000529288 OSMRQ99650 979 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 ADAM2Q99965 735 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 RNF26Q9BY78 433 aaPredicted RBP14.72□□□□□ -0.05
CPSF1-204ENST00000529288 LMAN2LQ9H0V9 348 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 RC3H2Q9HBD1 1191 aaKnown RBP14.72□□□□□ -0.05
CPSF1-204ENST00000529288 CD320Q9NPF0 282 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 ST3GAL5Q9UNP4 418 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 PCDHA10Q9Y5I2 948 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 COL1A2P08123 1366 aa14.72□□□□□ -0.05
CPSF1-204ENST00000529288 SIP14410 1827 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 FAM86C2PA6NEL3 165 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 GRXCR2A6NFK2 248 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 CPLX1O14810 134 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 GPR182O15218 404 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 MGEA5O60502 916 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 LINC00271P0C7V0 271 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 IFNAR1P17181 557 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 SARSP49591 514 aaKnown RBP14.71□□□□□ -0.05
CPSF1-204ENST00000529288 NTRK3Q16288 839 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 PUS10Q3MIT2 529 aaKnown RBP14.71□□□□□ -0.05
CPSF1-204ENST00000529288 ODR4Q5SWX8 454 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 RUFY3Q7L099 469 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 FAM178BQ8IXR5 827 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 SMAP1Q8IYB5 467 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-204ENST00000529288 NEK9Q8TD19 979 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 CLP1Q92989 425 aaKnown RBP14.71□□□□□ -0.05
CPSF1-204ENST00000529288 ZNF668Q96K58 619 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-204ENST00000529288 ERVK-5Q9HDB9 667 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 PLAGL2Q9UPG8 496 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 AKT3Q9Y243 479 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 MAFBQ9Y5Q3 323 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-204ENST00000529288 CYP46A1Q9Y6A2 500 aa14.71□□□□□ -0.05
CPSF1-204ENST00000529288 KDM3AQ9Y4C1 1321 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 TBKBP1A7MCY6 615 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 ZBTB42B2RXF5 422 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 GAS7O60861 476 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 C22orf31O95567 290 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 CIITAP33076 1130 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 GTF2F1P35269 517 aaKnown RBP eCLIP14.7□□□□□ -0.06
CPSF1-204ENST00000529288 CLCN3P51790 818 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 HYAL1Q12794 435 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 TMEM31Q5JXX7 168 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 EFCAB12Q6NXP0 572 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 LRRC71Q8N4P6 559 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 KLHL23Q8NBE8 558 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 MICAL1Q8TDZ2 1067 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 TMEM40Q8WWA1 233 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 GJA10Q969M2 543 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 SCLT1Q96NL6 688 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 PLVAPQ9BX97 442 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 AGXT2Q9BYV1 514 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 UPF3BQ9BZI7 483 aaKnown RBP14.7□□□□□ -0.06
CPSF1-204ENST00000529288 DISC1Q9NRI5 854 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 NRBP2Q9NSY0 501 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 CEP131Q9UPN4 1083 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 FAM50BQ9Y247 325 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 MUC3AQ02505 3323 aa14.7□□□□□ -0.06
CPSF1-204ENST00000529288 WDR64B1ANS9 1081 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 MSH4O15457 936 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 NCK2O43639 380 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 MMP1P03956 469 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 CRYBB1P53674 252 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-204ENST00000529288 TOB2Q14106 344 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-204ENST00000529288 FAM102BQ5T8I3 360 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 LRCH2Q5VUJ6 765 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 FBXL16Q8N461 479 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 SPPL3Q8TCT6 385 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 TBCKQ8TEA7 893 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 POF1BQ8WVV4 589 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 MAP7D2Q96T17 732 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 LRFN3Q9BTN0 628 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 TEKT3Q9BXF9 490 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 ZSWIM6Q9HCJ5 1215 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 KAT6AQ92794 2004 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 NID2Q14112 1375 aa14.69□□□□□ -0.06
CPSF1-204ENST00000529288 MAGEB2O15479 319 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 LINC01565O15544 149 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 OATP04181 439 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 ITGB1P05556 798 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 NEFLP07196 543 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 DNAJB1P25685 340 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 TMOD1P28289 359 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 IRS1P35568 1242 aa14.68□□□□□ -0.06
CPSF1-204ENST00000529288 USP11P51784 963 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms