RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	PNISR	Q8TF01	805 aa	Known RBP	6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	GDPD5	Q8WTR4	605 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	RHOV	Q96L33	236 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	CORO1B	Q9BR76	489 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	IL23A	Q9NPF7	189 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	COPRS	Q9NQ92	184 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	CACNA2D2	Q9NY47	1150 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	PRKAG3	Q9UGI9	489 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	NAP1L2	Q9ULW6	460 aa	Predicted RBP	6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	LEMD3	Q9Y2U8	911 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	LAMA1	P25391	3075 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	ATAD5	Q96QE3	1844 aa		6.27	□□□□□ -1.41
PABPC1-223	ENST00000523636	ZNF536	O15090	1300 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	TNKS	O95271	1327 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	UMODL1	Q5DID0	1318 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	CNTNAP5	Q8WYK1	1306 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	DOPEY1	Q5JWR5	2465 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636		A0A1W2PQ45	241 aa	Predicted RBP	6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636		A0A1W2PQY0	241 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	TRIM75P	A6NK02	468 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	DIAPH1	O60610	1272 aa	Known RBP	6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	ADRB1	P08588	477 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	CNGA1	P29973	690 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	GBP2	P32456	591 aa	Predicted RBP	6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	RGS2	P41220	211 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	GCLC	P48506	637 aa	Predicted RBP	6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	RSPO4	Q2I0M5	234 aa	Predicted RBP	6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	CCDC152	Q4G0S7	254 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	ZNF394	Q53GI3	561 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	DCAF15	Q66K64	600 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	LLGL2	Q6P1M3	1020 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	IGF2-AS	Q6U949	168 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	RINL	Q6ZS11	566 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	RPUSD2	Q8IZ73	545 aa	Known RBP	6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	ARRDC4	Q8NCT1	418 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	YTHDC1	Q96MU7	727 aa	Known RBP	6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	TOX2	Q96NM4	488 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	ZSWIM4	Q9H7M6	989 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	CCSER2	Q9H7U1	834 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	G3BP2	Q9UN86	482 aa	Known RBP	6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	COMMD10	Q9Y6G5	202 aa		6.26	□□□□□ -1.41
PABPC1-223	ENST00000523636	SPTA1	P02549	2419 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	ADAM11	O75078	769 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	SPATA31C1	P0DKV0	1188 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	LIG1	P18858	919 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	TFE3	P19532	575 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	ATP2B1	P20020	1258 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	MAOB	P27338	520 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	RACK1	P63244	317 aa	Known RBP	6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	CAMK2G	Q13555	558 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	RNF187	Q5TA31	235 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	APOBEC3H	Q6NTF7	200 aa	Known RBP	6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	C15orf52	Q6ZUT6	534 aa	Known RBP	6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	TRIM42	Q8IWZ5	723 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	SCYL3	Q8IZE3	742 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	STK35	Q8TDR2	534 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	MRPL18	Q9H0U6	180 aa	Known RBP	6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	PCDH12	Q9NPG4	1184 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	RBPJL	Q9UBG7	517 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	DBF4	Q9UBU7	674 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	ABCA12	Q86UK0	2595 aa		6.25	□□□□□ -1.41
PABPC1-223	ENST00000523636	UBR5	O95071	2799 aa	Predicted RBP	6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	ITPR3	Q14573	2671 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	MYO10	Q9HD67	2058 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	LOC100289279	A0A1B0GTE1	492 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	MEGF11	A6BM72	1044 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	RBAK-RBAKDN	I3L0D1	243 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	FGB	P02675	491 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	EIF2S2	P20042	333 aa	Known RBP	6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	BDNF	P23560	247 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	CYP2C18	P33260	490 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	LTBR	P36941	435 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	EIF4A3	P38919	411 aa	Known RBP	6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	CDK7	P50613	346 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	ATXN1	P54253	815 aa	Known RBP	6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	NLRP12	P59046	1061 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	BIRC2	Q13490	618 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	BMS1	Q14692	1282 aa	Known RBP	6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	FKBP1C	Q5VVH2	108 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	ZFPM1	Q8IX07	1006 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	TMEM105	Q8N8V8	129 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	TDRD7	Q8NHU6	1098 aa	Known RBP	6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	RPS6KC1	Q96S38	1066 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	SENP7	Q9BQF6	1050 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	UPF3B	Q9BZI7	483 aa	Known RBP	6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	MIR1-1HG	Q9H1L0	117 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	GREM2	Q9H772	168 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	CBX8	Q9HC52	389 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	KCNK4	Q9NYG8	393 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	TLR6	Q9Y2C9	796 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	PCDHGB7	Q9Y5F8	929 aa		6.24	□□□□□ -1.41
PABPC1-223	ENST00000523636	DNHD1	Q96M86	4753 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	COL11A1	P12107	1806 aa	Predicted RBP	6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	ZNF236	Q9UL36	1845 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	LCHN	A4D1U4	455 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	MINDY4B	A8MYZ0	360 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	RNF225	M0QZC1	329 aa	Predicted RBP	6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	SEPT4	O43236	478 aa		6.23	□□□□□ -1.41

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