RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SPO11Q9Y5K1 396 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 FHOD1Q9Y613 1164 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 PABPN1LA6NDY0 278 aaKnown RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 POM121BA6NF01 834 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 FAM177BA6PVY3 158 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 SMTNL1A8MU46 457 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 DDX3XO00571 662 aaKnown RBP eCLIP4.66□□□□□ -1.66
SKP1-209ENST00000522552 DTNBO60941 627 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 SKAP2O75563 359 aaPredicted RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 KRT37O76014 449 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 ARIH2O95376 493 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 PAPLNO95428 1278 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 ATXN1P54253 815 aaKnown RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 AMPD2Q01433 879 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 PMS2P11Q13670 270 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 UBAP2LQ14157 1087 aaKnown RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 PLCB4Q15147 1175 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 MEA1Q16626 185 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 ARHGAP44Q17R89 818 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 TOR2AQ5JU69 321 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 ZBTB37Q5TC79 503 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 FAM205BPQ63HN1 556 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 APOA5Q6Q788 366 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 LBX2Q6XYB7 198 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 MAEAQ7L5Y9 396 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 HID1Q8IV36 788 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 MICALL1Q8N3F8 863 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 FIBCD1Q8N539 461 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 SYTL5Q8TDW5 730 aaPredicted RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 RIN2Q8WYP3 895 aaPredicted RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 ELF4Q99607 663 aaPredicted RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 CGRRF1Q99675 332 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 SORBS1Q9BX66 1292 aaKnown RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 C22orf23Q9BZE7 217 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 GPR27Q9NS67 375 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 DNAJB12Q9NXW2 375 aaKnown RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.66□□□□□ -1.66
SKP1-209ENST00000522552 PCDHGC5Q9Y5F6 944 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 SNX5Q9Y5X3 404 aa4.66□□□□□ -1.66
SKP1-209ENST00000522552 H7C1D1 291 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 ARNTLO00327 626 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 WNT9AO14904 365 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 IRAK2O43187 625 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 BNIP3LO60238 219 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 ADAMTS2O95450 1211 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 RAC2P15153 192 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 CD33P20138 364 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 MX2P20592 715 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 LORP23490 312 aaPredicted RBP4.65□□□□□ -1.66
SKP1-209ENST00000522552 CTNNA1P35221 906 aaKnown RBP4.65□□□□□ -1.66
SKP1-209ENST00000522552 CAP2P40123 477 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 PIK3CAP42336 1068 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 HSPA7P48741 367 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 CEBPAP49715 358 aaPredicted RBP4.65□□□□□ -1.66
SKP1-209ENST00000522552 CABP4P57796 275 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 LBRQ14739 615 aaKnown RBP4.65□□□□□ -1.66
SKP1-209ENST00000522552 SNX17Q15036 470 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 DPY19L1Q2PZI1 675 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 FAM47CQ5HY64 1035 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 CCDC129Q6ZRS4 1044 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 LRRTM4Q86VH4 590 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 PPM1NQ8N819 430 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 ATG16L2Q8NAA4 619 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 SIMC1Q8NDZ2 872 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 WHAMMQ8TF30 809 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 UCMAQ8WVF2 138 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 BRI3BPQ8WY22 251 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 APIPQ96GX9 242 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 ZDHHC15Q96MV8 337 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 ACAP3Q96P50 834 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 FMNL2Q96PY5 1086 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 ELAC1Q9H777 363 aaKnown RBP4.65□□□□□ -1.66
SKP1-209ENST00000522552 CNTD2Q9H8S5 307 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 TOMM22Q9NS69 142 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 CEP72Q9P209 647 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 AASSQ9UDR5 926 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 SLC13A4Q9UKG4 626 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 SRPK3Q9UPE1 567 aa4.65□□□□□ -1.66
SKP1-209ENST00000522552 IGF1RP08069 1367 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 GTPBP10A4D1E9 387 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 FANCGO15287 622 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 P4HA2O15460 535 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 IGHDP01880 384 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 DNTTP04053 509 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 THBDP07204 575 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 CPB1P15086 417 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 AKR1B1P15121 316 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 ENPP1P22413 925 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 CDC25BP30305 580 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 NTF4P34130 210 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 STAT1P42224 750 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 MAN2A2P49641 1150 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 CLNS1AP54105 237 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 TBC1D8BQ0IIM8 1120 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 PCSK7Q16549 785 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 PFKFB4Q16877 469 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 MPEG1Q2M385 716 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 ZACNQ401N2 412 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 MFSD4BQ5TF39 518 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 JMJD6Q6NYC1 403 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms