RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 MFAP3P55082 362 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 LMNB2Q03252 620 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ZNF449Q6P9G9 518 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 LCA5Q86VQ0 697 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 MB21D1Q8N884 522 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 DACT3Q96B18 629 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 PANX2Q96RD6 677 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 RMDN3Q96TC7 470 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ELAC2Q9BQ52 826 aaKnown RBP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 LSG1Q9H089 658 aaKnown RBP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ZNF711Q9Y462 761 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 NEXMIFQ5QGS0 1516 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 EIF2AK2P19525 551 aaKnown RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 C2orf54Q08AI8 447 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 TBC1D16Q8TBP0 767 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 PIP4K2CQ8TBX8 421 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 SH3RF3Q8TEJ3 882 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 OSBP2Q969R2 916 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 BLZF1Q9H2G9 400 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 CEP170BQ9Y4F5 1589 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 WDR19Q8NEZ3 1342 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 GMNCA6NCL1 334 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 M0R2C6 588 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 PPP1R12AO14974 1030 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 MEFVO15553 781 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 CYP21A2P08686 494 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 ATF2P15336 505 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 ANXA13P27216 316 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 ADAM9Q13443 819 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 HHIPL2Q6UWX4 724 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 ANKRD13CQ8N6S4 541 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 APOL6Q9BWW8 343 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 MROH2AA6NES4 1674 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 SETD1BQ9UPS6 1966 aaKnown RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 MAN1A2O60476 641 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 ESRRAP11474 423 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 XPAP23025 273 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 STAT3P40763 770 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 ZNF157P51786 506 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 PSD3Q9NYI0 1048 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 MROH1Q8NDA8 1641 aa13.18□□□□□ -0.3
PCDHGA6-201ENST00000517434 DIP2AQ14689 1571 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 WDR64B1ANS9 1081 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 PGRMC1O00264 195 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 SH3BP5O60239 455 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 PPP6R2O75170 966 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 DCTN3O75935 186 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 CD2BP2O95400 341 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 CETPP11597 493 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 PIK3CAP42336 1068 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 PHKA2P46019 1235 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 ARHGAP44Q17R89 818 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 DYDC2Q96IM9 177 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 MED7O43513 233 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 PRKAB2O43741 272 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 TTC4O95801 387 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 DLATP10515 647 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 CHRNA5P30532 468 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 MCAMP43121 646 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 MSH2P43246 934 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 HDLBPQ00341 1268 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 TLR7Q9NYK1 1049 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 F8W8V4 182 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 PRDX5P30044 214 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 RBL2Q08999 1139 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 GRAMD1BQ3KR37 738 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 GLE1Q53GS7 698 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 C6orf118Q5T5N4 469 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 PUS7LQ9H0K6 701 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 RASGRF2O14827 1237 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 SPAG7O75391 227 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 IFNB1P01574 187 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 MAN1A1P33908 653 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 GGCXP38435 758 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 SNX1Q13596 522 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 CUL1Q13616 776 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 KRT81Q14533 505 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 RPS6KA2Q15349 733 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 TCP11X2Q5H9J9 407 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 ARL6IP4Q66PJ3 421 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 C7orf31Q8N865 590 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 THOC1Q96FV9 657 aaKnown RBP13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 LRGUKQ96M69 825 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 CCDC138Q96M89 665 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 FAM20AQ96MK3 541 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 C2orf40Q9H1Z8 148 aa13.17□□□□□ -0.3
PCDHGA6-201ENST00000517434 KIAA1586Q9HCI6 787 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms