RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 PDE12Q6L8Q7 609 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CCDC50Q8IVM0 306 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CCDC112Q8NEF3 446 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 FNIP1Q8TF40 1166 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PEX13Q92968 403 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 L3MBTL3Q96JM7 780 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 JAKMIP1Q96N16 626 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 ZPBPQ9BS86 351 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CCDC106Q9BWC9 280 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 SLC13A1Q9BZW2 595 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 NTN4Q9HB63 628 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF277Q9NRM2 450 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 ARHGEF38Q9NXL2 777 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 AIPL1Q9NZN9 384 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 TTC7AQ9ULT0 858 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PCDHB6Q9Y5E3 794 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 KIF13BQ9NQT8 1826 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CHURC1-FNTBB4DL54 471 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PSMD14O00487 310 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 SNPHO15079 494 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 SEC31AO94979 1220 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PENKP01210 267 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PGRP06401 933 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 HEXBP07686 556 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 IFIT2P09913 472 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 EZRP15311 586 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 H2AFXP16104 143 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PRKACAP17612 351 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CTNNA1P35221 906 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CENPCQ03188 943 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 OASLQ15646 514 aaKnown RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 USH1GQ495M9 461 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 SETMARQ53H47 684 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 XKR5Q6UX68 686 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 NLRP9Q7RTR0 991 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CDKL2Q92772 493 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 SAMD11Q96NU1 681 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CATSPER2Q96P56 530 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 EDEM3Q9BZQ6 932 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 PLEKHA4Q9H4M7 779 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 CCDC177Q9NQR7 707 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-208ENST00000514335 IL20Q9NYY1 176 aa7.85□□□□□ -1.15
NIPBL-208ENST00000514335 LY75O60449 1722 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 OR5K4A6NMS3 321 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 TTLL13PA6NNM8 815 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 TNFRSF10AO00220 468 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 KRIT1O00522 736 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 ZBTB39O15060 712 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 POP4O95707 220 aaKnown RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 APOEP02649 317 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 MZF1P28698 734 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 KPNA1P52294 538 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 POLR2GP62487 172 aaKnown RBP eCLIP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 RUNX1T1Q06455 604 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 RSRC2Q7L4I2 434 aaKnown RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 FAM200AQ8TCP9 573 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 LLPHQ9BRT6 129 aaKnown RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 MRPL9Q9BYD2 267 aaKnown RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 SNX25Q9H3E2 840 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 BLOC1S4Q9NUP1 217 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 STIM2Q9P246 746 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 SUCLA2Q9P2R7 463 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 PARP2Q9UGN5 583 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 NOB1Q9ULX3 412 aaKnown RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 NUTM2FA1L443 756 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 A8MX80 341 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 MYO1FO00160 1098 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 STK25O00506 426 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 FOXP2O15409 715 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 STX6O43752 255 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 HOXC12P31275 282 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 L1CAMP32004 1257 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 FXR1P51114 621 aaKnown RBP eCLIP7.84□□□□□ -1.155e-6■■■□□ 17.8
NIPBL-208ENST00000514335 CCNA1P78396 465 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 BEX3Q00994 111 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 NIPAL4Q0D2K0 466 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 CCDC153Q494R4 210 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 PPP2R2DQ66LE6 453 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 LPCAT2Q7L5N7 544 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 DNAJB7Q7Z6W7 309 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 TAB3Q8N5C8 712 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 OSCP1Q8WVF1 389 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 OPTNQ96CV9 577 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 PCMTD1Q96MG8 357 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 AIFM3Q96NN9 605 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 ADNPQ9H2P0 1102 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 SH2B1Q9NRF2 756 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 FARSBQ9NSD9 589 aaKnown RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 ANO10Q9NW15 660 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 ZIM2Q9NZV7 527 aa7.84□□□□□ -1.15
NIPBL-208ENST00000514335 MAFBQ9Y5Q3 323 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 POLR3AO14802 1390 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-208ENST00000514335 SMG6Q86US8 1419 aaKnown RBP7.84□□□□□ -1.16
NIPBL-208ENST00000514335 ANO9A1A5B4 782 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 CCDC166P0CW27 439 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 LSP1P33241 339 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 BAG6P46379 1132 aa7.83□□□□□ -1.16
NIPBL-208ENST00000514335 CLCN6P51797 869 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms