RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 LPIN1Q14693 890 aa23.99■■□□□ 1.43
UBE2D3-229ENST00000510129 XKR3Q5GH77 459 aa23.99■■□□□ 1.43
UBE2D3-229ENST00000510129 PIAS4Q8N2W9 510 aaPredicted RBP23.99■■□□□ 1.43
UBE2D3-229ENST00000510129 FBXO18Q8NFZ0 1043 aa23.99■■□□□ 1.43
UBE2D3-229ENST00000510129 INSL6Q9Y581 213 aa23.99■■□□□ 1.43
UBE2D3-229ENST00000510129 DTNBO60941 627 aa23.98■■□□□ 1.43
UBE2D3-229ENST00000510129 CA3P07451 260 aa23.98■■□□□ 1.43
UBE2D3-229ENST00000510129 DEFB103AP81534 67 aa23.98■■□□□ 1.43
UBE2D3-229ENST00000510129 ORC2Q13416 577 aaPredicted RBP23.98■■□□□ 1.43
UBE2D3-229ENST00000510129 MAP7D2Q96T17 732 aa23.98■■□□□ 1.43
UBE2D3-229ENST00000510129 NIFKQ9BYG3 293 aaKnown RBP23.98■■□□□ 1.43
UBE2D3-229ENST00000510129 VAV3Q9UKW4 847 aa23.98■■□□□ 1.43
UBE2D3-229ENST00000510129 ZNF862O60290 1169 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 GNL2Q13823 731 aaKnown RBP23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 TCTN1Q2MV58 587 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 WDR81Q562E7 1941 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 EARS2Q5JPH6 523 aaKnown RBP23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 MICAL3Q7RTP6 2002 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 EXOC8Q8IYI6 725 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 KIAA0319LQ8IZA0 1049 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 MYOCDQ8IZQ8 938 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 METTL13Q8N6R0 699 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 MYLIPQ8WY64 445 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 GJA10Q969M2 543 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 RNF216Q9NWF9 866 aaPredicted RBP23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 PPME1Q9Y570 386 aa23.97■■□□□ 1.43
UBE2D3-229ENST00000510129 SZT2Q5T011 3432 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 NEMFO60524 1076 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 P4HBP07237 508 aaKnown RBP23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 MYOGP15173 224 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 QARSP47897 775 aaKnown RBP23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 FOSBP53539 338 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 CDC42EP1Q00587 391 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 TBC1D8BQ0IIM8 1120 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 PAK2Q13177 524 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 CALCRLQ16602 461 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 TRMT1LQ7Z2T5 733 aaKnown RBP23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 POTEDQ86YR6 584 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 HAS1Q92839 578 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 TOP1MTQ969P6 601 aa23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 JPH2Q9BR39 696 aaPredicted RBP23.96■■□□□ 1.43
UBE2D3-229ENST00000510129 EPHA7Q15375 998 aa23.95■■□□□ 1.42
UBE2D3-229ENST00000510129 UGCGQ16739 394 aa23.95■■□□□ 1.42
UBE2D3-229ENST00000510129 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.95■■□□□ 1.424e-6■■■□□ 19.2
UBE2D3-229ENST00000510129 ZBTB10Q96DT7 871 aa23.95■■□□□ 1.42
UBE2D3-229ENST00000510129 SEPT9Q9UHD8 586 aaPredicted RBP23.95■■□□□ 1.42
UBE2D3-229ENST00000510129 PCDHA12Q9UN75 941 aa23.95■■□□□ 1.42
UBE2D3-229ENST00000510129 SIP14410 1827 aa23.95■■□□□ 1.42
UBE2D3-229ENST00000510129 FAM205CA6NFA0 338 aa23.94■■□□□ 1.42
UBE2D3-229ENST00000510129 TRAPPC10P48553 1259 aa23.94■■□□□ 1.42
UBE2D3-229ENST00000510129 DNM2P50570 870 aa23.94■■□□□ 1.42
UBE2D3-229ENST00000510129 CRYBB1P53674 252 aaPredicted RBP23.94■■□□□ 1.42
UBE2D3-229ENST00000510129 TMEM62Q0P6H9 643 aa23.94■■□□□ 1.42
UBE2D3-229ENST00000510129 EFCAB12Q6NXP0 572 aa23.94■■□□□ 1.42
UBE2D3-229ENST00000510129 NEK9Q8TD19 979 aa23.94■■□□□ 1.42
UBE2D3-229ENST00000510129 NOL7Q9UMY1 257 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-229ENST00000510129 PTPRSQ13332 1948 aa23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 GPR182O15218 404 aa23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 HTRA4P83105 476 aaPredicted RBP23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 TAP1Q03518 808 aa23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 TARBP2Q15633 366 aaKnown RBP23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 BANK1Q8NDB2 785 aa23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 MAFAQ8NHW3 353 aaPredicted RBP23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 TMX3Q96JJ7 454 aa23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 PRDM12Q9H4Q4 367 aa23.93■■□□□ 1.42
UBE2D3-229ENST00000510129 CD52P31358 61 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 GUCY1B3Q02153 619 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 OTUD6AQ7L8S5 288 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 NOSTRINQ8IVI9 506 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 C4orf19Q8IY42 314 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 YME1L1Q96TA2 773 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 OSBPL7Q9BZF2 842 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 ZSWIM4Q9H7M6 989 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 AGO3Q9H9G7 860 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 PADI3Q9ULW8 664 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 AKT3Q9Y243 479 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 GINS2Q9Y248 185 aa23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.92■■□□□ 1.42
UBE2D3-229ENST00000510129 DDX11L8A8MPP1 907 aa23.91■■□□□ 1.42
UBE2D3-229ENST00000510129 EML1O00423 815 aa23.91■■□□□ 1.42
UBE2D3-229ENST00000510129 RPS6KA5O75582 802 aa23.91■■□□□ 1.42
UBE2D3-229ENST00000510129 NCAPH2Q6IBW4 605 aa23.91■■□□□ 1.42
UBE2D3-229ENST00000510129 LINC01465Q8N7H1 131 aa23.91■■□□□ 1.42
UBE2D3-229ENST00000510129 TTC12Q9H892 705 aaPredicted RBP23.91■■□□□ 1.42
UBE2D3-229ENST00000510129 SUGCTQ9HAC7 445 aa23.91■■□□□ 1.42
UBE2D3-229ENST00000510129 COL4A6Q14031 1691 aa23.91■■□□□ 1.42
UBE2D3-229ENST00000510129 ENPP3O14638 875 aa23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 CLCN3P51790 818 aa23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 SPIRE1Q08AE8 756 aa23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 MTERF2Q49AM1 385 aa23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 FAM117BQ6P1L5 589 aa23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 TMCO2Q7Z6W1 182 aaPredicted RBP23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 SP7Q8TDD2 431 aaPredicted RBP23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 SLC7A3Q8WY07 619 aa23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 SAMD11Q96NU1 681 aa23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 MTMR9Q96QG7 549 aa23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 TGS1Q96RS0 853 aaKnown RBP23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 BACH2Q9BYV9 841 aa23.9■■□□□ 1.42
UBE2D3-229ENST00000510129 GTPBP6O43824 516 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms